PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021648038.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 255aa MW: 29836.6 Da PI: 5.0511 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 130.1 | 1.6e-40 | 4 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk...leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 l+pGfrF Pt+eel+++yL++k+egk+ +++ +vi+ +diy+++ wdLp+ ++++ ++w+fF++r+k++a+g r+nr t++gyWk+tg+ XP_021648038.1 4 LAPGFRFYPTEEELISFYLHNKLEGKRndlNQAIDVIPVLDIYDFNHWDLPQlsgeLCRQDPEQWFFFIPRQKREAQGGRPNRLTTTGYWKSTGS 98 579************************5554445679999***********656654455677******************************** PP NAM 89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 v+s+ +++ + +k+t+vfy gr p g+kt+W+m+eyr+ XP_021648038.1 99 PGYVYSStNNRCIAIKRTMVFYMGRIPLGRKTEWIMNEYRV 139 *****9867778***************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 255 aa Download sequence |
MEALAPGFRF YPTEEELISF YLHNKLEGKR NDLNQAIDVI PVLDIYDFNH WDLPQLSGEL 60 CRQDPEQWFF FIPRQKREAQ GGRPNRLTTT GYWKSTGSPG YVYSSTNNRC IAIKRTMVFY 120 MGRIPLGRKT EWIMNEYRVI QEEASSSTGP NPTLRQEFTL CRVYKNSKCR RAFDRRPIGV 180 LMGEPSVQLV TSEEARTNQQ NPQLMVDRST FKGSCPEENG PSSQMAMAVD NEPLWDWEDL 240 YDWEDYARWS SDIWL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G22380.1 | 9e-72 | NAC family protein |