PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021648036.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 256aa MW: 29857.4 Da PI: 4.8259 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 134.1 | 9.8e-42 | 4 | 140 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 l+pGfrF Pt+eel+++yL++k+eg++ +++vi+ +diy+++PwdLp+ ++++ ++w+fF++r+k++a+g r+nr t++gyWk+tg XP_021648036.1 4 LAPGFRFYPTEEELISFYLHNKLEGNRndlnQAIDRVIPVLDIYDFNPWDLPQlsgeLCRQDPEQWFFFTPRQKREAQGGRPNRLTTTGYWKSTG 98 579************************55533344479999***********656654455677******************************* PP NAM 88 kdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + v+s+ +++ + +k+t+vfy+gr p g+kt+W m+eyr+ XP_021648036.1 99 SPGYVYSSyNNRCIAIKRTMVFYTGRIPLGRKTEWKMNEYRV 140 *******988889***************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 256 aa Download sequence |
MEALAPGFRF YPTEEELISF YLHNKLEGNR NDLNQAIDRV IPVLDIYDFN PWDLPQLSGE 60 LCRQDPEQWF FFTPRQKREA QGGRPNRLTT TGYWKSTGSP GYVYSSYNNR CIAIKRTMVF 120 YTGRIPLGRK TEWKMNEYRV IQEEASSSTG PNPTLRQEFT LCRVYKNSKC RRAFDRRPIG 180 VLMGEPSVQL VTSEEARTNQ QNPQLMVDRS IFEGSCPEEN GPSSQMAMAV DNEPLWDWED 240 LYDWEDYARW SSDIGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G22380.1 | 1e-75 | NAC family protein |