PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021647919.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WRKY

Protein Properties

Length: 324aa MW: 35933.3 Da PI: 9.2418

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021647919.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	93.7	1.4e-29	173	232	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ ++++ pr+Y++C++a +Cpvkkkv+rs ed++v++ tYegeHnh+ XP_021647919.1 173 VKDGYQWRKYGQKVTRDNPSPRAYFKCSFApSCPVKKKVQRSIEDQSVLVATYEGEHNHP 232 58*************************99**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence
MKTSSTSAAM DYSYSLVDTS LDLNVNPRSA KDVAPVQERF GLVKEVQSNF MELGRKVSLK 60 EENGALVEEL NRVSAENKKL TEMLAVMCEN YNALRGQLMD YMSKNPDKEL SPSRKRKSES 120 SNNNNDNTIA MNRNSESSST DEESSKKPRE EVIKSKISRV YMRTEASDTS LVVKDGYQWR 180 KYGQKVTRDN PSPRAYFKCS FAPSCPVKKK VQRSIEDQSV LVATYEGEHN HPHPSQMEAT 240 SVATRSLNFG SAPCSASLGS AGPTITLDLT KPKSSNNDAR SSKSRMETTP EIRQFLVEHM 300 ASSLTKDPNF TAALAAAISG RMLQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	113	118	SRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80840.1	4e-94	WRKY family protein