PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021647856.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 534aa MW: 58022.3 Da PI: 7.1181

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021647856.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.3	4e-19	57	104	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv++v+++G g+W+++ r+ g+ R++k+c++rw ++l XP_021647856.1 57 KGPWTAEEDAILVEYVRKHGEGNWNAVQRHSGLARCGKSCRLRWANHL 104 79******************************************9986 PP
2	Myb_DNA-binding	50.5	4.8e-16	110	153	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++++eE+ l+v++++++G++ W++ a+ ++ gRt++++k++w++ XP_021647856.1 110 KGAFSPEEERLIVELHAKFGNK-WARMASLLP-GRTDNEIKNYWNT 153 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 534 aa Download sequence
MLMSTNNGGS EGGDGDVPAA ASHQGGGGGV DMHANIHHGG SAKGGGGDGN GETHLKKGPW 60 TAEEDAILVE YVRKHGEGNW NAVQRHSGLA RCGKSCRLRW ANHLRPNLKK GAFSPEEERL 120 IVELHAKFGN KWARMASLLP GRTDNEIKNY WNTRVKRHQR QGLPLYPPDI QPQHQPSPHF 180 HHHRSSSFTF PTPNTATHTL TPTSATPPPL SPSTTSTSFP TLPLFDFSQP HHHHEFSYXL 240 PLFDFSIPRT PPILQTPIRF KRLSSSPNMA TLTTTNNPSS ASSISPNSHF SLPLSPLPHA 300 SPSNTGPLGH QIPSCFTRXS EFHDELQRDN QEMCSLLAAL TQPELPSNQF LSATNQNRNL 360 GIGIATTVGK FGRRATKKKI GNLIKDKVNG NLGLALEDLL QEAKALAEFE QTATEHSSLV 420 LQEQKPKLLD SDGFGLHWDQ SSSHALSSGL EPRVDVAGQL NAIPEDFSKV LNALPSPMQP 480 ELYGDSVDIS NGPSSVITDD NIGFEMQQIA SLFPLADNGR TLGSCSWDNL PGIC

Sequence ? help Back to Top

Protein Sequence Length: 534 aa Download sequence

MLMSTNNGGS EGGDGDVPAA ASHQGGGGGV DMHANIHHGG SAKGGGGDGN GETHLKKGPW  60
TAEEDAILVE YVRKHGEGNW NAVQRHSGLA RCGKSCRLRW ANHLRPNLKK GAFSPEEERL  120
IVELHAKFGN KWARMASLLP GRTDNEIKNY WNTRVKRHQR QGLPLYPPDI QPQHQPSPHF  180
HHHRSSSFTF PTPNTATHTL TPTSATPPPL SPSTTSTSFP TLPLFDFSQP HHHHEFSYXL  240
PLFDFSIPRT PPILQTPIRF KRLSSSPNMA TLTTTNNPSS ASSISPNSHF SLPLSPLPHA  300
SPSNTGPLGH QIPSCFTRXS EFHDELQRDN QEMCSLLAAL TQPELPSNQF LSATNQNRNL  360
GIGIATTVGK FGRRATKKKI GNLIKDKVNG NLGLALEDLL QEAKALAEFE QTATEHSSLV  420
LQEQKPKLLD SDGFGLHWDQ SSSHALSSGL EPRVDVAGQL NAIPEDFSKV LNALPSPMQP  480
ELYGDSVDIS NGPSSVITDD NIGFEMQQIA SLFPLADNGR TLGSCSWDNL PGIC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.2	2e-66	MYB family protein