PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021647626.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 226aa    MW: 25382.5 Da    PI: 8.3793
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021647626.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.94.2e-171360148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W+++Ed++l+++++++G g+W+t ++  g+ R++k+c++rw +yl
   XP_021647626.1 13 KGAWSKQEDQKLINYIRKHGEGCWRTLPQAAGLLRCGKSCRLRWTNYL 60
                     79******************************99************97 PP

2Myb_DNA-binding52.31.3e-1666111148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++ ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l
   XP_021647626.1  66 RGNFAEDEEDLIIKLHALLGNR-WSLIAGRLP-GRTDNEVKNYWNSHL 111
                      8999******************.*********.************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MRKPCCDKQD TNKGAWSKQE DQKLINYIRK HGEGCWRTLP QAAGLLRCGK SCRLRWTNYL  60
RPDLKRGNFA EDEEDLIIKL HALLGNRWSL IAGRLPGRTD NEVKNYWNSH LRRKLIKMGI  120
DPNNHRLTHN LPRLQIPQDS GSATSSGGLK SDTEPHNDNN QQASDAASCL EDGPIALADL  180
NLDLTISFPS STAPNTTPEE KQKNTESNLS KEPEVPAASF TLLLFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09460.19e-78MYB family protein