PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021647543.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WRKY

Protein Properties

Length: 581aa MW: 63763.6 Da PI: 6.8844

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021647543.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.2	3.4e-33	241	298	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh+k XP_021647543.1 241 EDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSL-DGQITEIVYKGSHNHPK 298 7**************************************.*************85 PP
2	WRKY	105.5	2.8e-33	413	471	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct +gCpv+k+ver+++d ++v++tYeg+Hnh+ XP_021647543.1 413 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASHDLRAVITTYEGKHNHD 471 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 581 aa Download sequence
MAFSSGSLDT SANSHPSSFS FSTHSCMTNS FSDLLASGAD DESLNTKIEN HRRGLSDRIA 60 ERTGSGVPKF KSLPPPSLPI SPPAVSPSSY FAIPPGLSPT ELLDSPVLLN TSNILPSPTT 120 GTFPAQAAKW NTNSGRNQQN VKQEDPNFSD FSFQPPTRPP TSSSTMFQSS NTTIQTAQQQ 180 GWSFQESVKQ DDFASGKSTQ SFSPEIAAIQ TNAQSNNGFQ SDYGGGQKQQ YQSARDQRRS 240 EDGYNWRKYG QKQVKGSENP RSYYKCTYPN CPTKKKVERS LDGQITEIVY KGSHNHPKPQ 300 STRRSSSSSS SVSNQAIIAP NPASNEMQDQ SLVIHGSGQM DSVATPENSS ISIGDDDFDS 360 QKSKSRSDDF DEDEPEAKRW KIEGENEGIS APGSRTVREP RVVVQTTSDI DILDDGYRWR 420 KYGQKVVKGN PNPRSYYKCT NPGCPVRKHV ERASHDLRAV ITTYEGKHNH DVPAARGSGS 480 SNNSVNRALH ENNNAAMAIP LPIVNHHSNN LTNAIRHQRL PATSEGEAPF SLEMFQNPES 540 FAFSGFGNPM GSYTNQSSTD NVFSRAKEEP RDDMFLESLL C

Sequence ? help Back to Top

Protein Sequence Length: 581 aa Download sequence

MAFSSGSLDT SANSHPSSFS FSTHSCMTNS FSDLLASGAD DESLNTKIEN HRRGLSDRIA  60
ERTGSGVPKF KSLPPPSLPI SPPAVSPSSY FAIPPGLSPT ELLDSPVLLN TSNILPSPTT  120
GTFPAQAAKW NTNSGRNQQN VKQEDPNFSD FSFQPPTRPP TSSSTMFQSS NTTIQTAQQQ  180
GWSFQESVKQ DDFASGKSTQ SFSPEIAAIQ TNAQSNNGFQ SDYGGGQKQQ YQSARDQRRS  240
EDGYNWRKYG QKQVKGSENP RSYYKCTYPN CPTKKKVERS LDGQITEIVY KGSHNHPKPQ  300
STRRSSSSSS SVSNQAIIAP NPASNEMQDQ SLVIHGSGQM DSVATPENSS ISIGDDDFDS  360
QKSKSRSDDF DEDEPEAKRW KIEGENEGIS APGSRTVREP RVVVQTTSDI DILDDGYRWR  420
KYGQKVVKGN PNPRSYYKCT NPGCPVRKHV ERASHDLRAV ITTYEGKHNH DVPAARGSGS  480
SNNSVNRALH ENNNAAMAIP LPIVNHHSNN LTNAIRHQRL PATSEGEAPF SLEMFQNPES  540
FAFSGFGNPM GSYTNQSSTD NVFSRAKEEP RDDMFLESLL C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-107	WRKY family protein