PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021646319.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HRT-like

Protein Properties

Length: 505aa MW: 55930.8 Da PI: 9.4283

Description

HRT-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021646319.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HRT-like	57.6	2e-18	275	305	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCG+i++dG +C+r+Pv+gRKRCe HKGmRi XP_021646319.1 275 ICGFIMNDGVPCRRPPVPGRKRCEGHKGMRI 305 8*****************************7 PP
2	HRT-like	57.1	2.9e-18	339	367	1	29
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGm 29 +CGv+l+dG++C+rq+v+gRKRCeeHKG+ XP_021646319.1 339 TCGVNLGDGNFCRRQAVPGRKRCEEHKGK 367 7***************************7 PP
3	HRT-like	53.7	3.3e-17	424	453	1	30
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmR 30 iCG++l++Gs+C+rqP +g+KRC++HKG+R XP_021646319.1 424 ICGATLGNGSFCRRQPTQGNKRCWQHKGKR 453 8****************************9 PP
4	HRT-like	61.9	9.2e-20	465	495	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 +CGv+l++GsvC+r Pv+gRKRCe+HKGmR+ XP_021646319.1 465 TCGVALQNGSVCMRAPVHGRKRCEQHKGMRV 495 7*****************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MGEGEESAAP TASASRLKRE DYKRTKHDSH FSKWQVLIGP TDWEDYSQGK EGVARYRVHN 60 LPTSSGPGLY ELGVAVSRSG LGRLVGKLDP DDIVVVYLGQ ADNVRSRLQR YGRSGAHLGN 120 AYATGHWDSK NDSPQKGLGL FEEIFSGGHS IVFRWASMKD KRNAEKTEAQ LLDTFDYAWN 180 KGSNGARRPN DILQKISKIA LSTNRFSSIS KRLLFLRPGQ VGIKIEANKP LSPEKCTIPA 240 DEDGKSFLKG IFKFNRSQPR LVSDKCGIDQ DFIHICGFIM NDGVPCRRPP VPGRKRCEGH 300 KGMRIYGSSS KPISEGSSNY LPGVHLDPST HYEQDYATTC GVNLGDGNFC RRQAVPGRKR 360 CEEHKGKWVN SCVSNPVAEE ECHPAYNGSM DWTNNIVSPG SNMDQEPRFH SPYEVSIDEH 420 VSSICGATLG NGSFCRRQPT QGNKRCWQHK GKRGDSSISR FDTVTCGVAL QNGSVCMRAP 480 VHGRKRCEQH KGMRVSTSFS RGVTS

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MGEGEESAAP TASASRLKRE DYKRTKHDSH FSKWQVLIGP TDWEDYSQGK EGVARYRVHN  60
LPTSSGPGLY ELGVAVSRSG LGRLVGKLDP DDIVVVYLGQ ADNVRSRLQR YGRSGAHLGN  120
AYATGHWDSK NDSPQKGLGL FEEIFSGGHS IVFRWASMKD KRNAEKTEAQ LLDTFDYAWN  180
KGSNGARRPN DILQKISKIA LSTNRFSSIS KRLLFLRPGQ VGIKIEANKP LSPEKCTIPA  240
DEDGKSFLKG IFKFNRSQPR LVSDKCGIDQ DFIHICGFIM NDGVPCRRPP VPGRKRCEGH  300
KGMRIYGSSS KPISEGSSNY LPGVHLDPST HYEQDYATTC GVNLGDGNFC RRQAVPGRKR  360
CEEHKGKWVN SCVSNPVAEE ECHPAYNGSM DWTNNIVSPG SNMDQEPRFH SPYEVSIDEH  420
VSSICGATLG NGSFCRRQPT QGNKRCWQHK GKRGDSSISR FDTVTCGVAL QNGSVCMRAP  480
VHGRKRCEQH KGMRVSTSFS RGVTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56780.1	1e-118	HRT-like family protein