PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021645623.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 438aa MW: 49350.1 Da PI: 6.8404

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021645623.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	67.5	2.7e-21	110	200	1	79
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstc 79 +Wt++ v++Li+++ ++++ + +kk++W+ vsk m ++g+++sp+qC++k+++lnkryk+++++ +++ +++++++ XP_021645623.1 110 KWTDNAVRLLIAVVACVGDDGAFEGvdrlkrksgilQKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNDILGRGtSCRVVENP 200 7************777777754334455566788*******************************************9447766665 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
MDTSGLGGRF LSGPTSGLLD LESPIHRRNH MNLMGGLDND HQTMGLMEVK GSIPKGYSAN 60 FNKGKALSPL DATNNGNASE DDEPSFTDDG NGESTSGAKS KNGSPWQRMK WTDNAVRLLI 120 AVVACVGDDG AFEGVDRLKR KSGILQKKGK WKTVSKIMIS KGCHVSPQQC EDKFNDLNKR 180 YKRLNDILGR GTSCRVVENP ALMDSKPHLS AKAKDDVRKI LNSKHLFYKE MCAYHNGQRI 240 PNCQDLDLQG CSLPLERCSK DNNGSGKEEA EGHDDSDDDE SDNEDDSNAN EDGERMGKYE 300 RNKVNEEDAH LWSQSGGCGG FDVAMAQDPT VSLWEKKESV KKQKLQLLEQ RVSIQAQAFE 360 LEKQRFKWLR YCSKKDREFE RLRLENERMR LENEQSILQL RQKQLEMDFR SSKTSRDPTS 420 LGVDKMQARD QIDLGRHQ

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

MDTSGLGGRF LSGPTSGLLD LESPIHRRNH MNLMGGLDND HQTMGLMEVK GSIPKGYSAN  60
FNKGKALSPL DATNNGNASE DDEPSFTDDG NGESTSGAKS KNGSPWQRMK WTDNAVRLLI  120
AVVACVGDDG AFEGVDRLKR KSGILQKKGK WKTVSKIMIS KGCHVSPQQC EDKFNDLNKR  180
YKRLNDILGR GTSCRVVENP ALMDSKPHLS AKAKDDVRKI LNSKHLFYKE MCAYHNGQRI  240
PNCQDLDLQG CSLPLERCSK DNNGSGKEEA EGHDDSDDDE SDNEDDSNAN EDGERMGKYE  300
RNKVNEEDAH LWSQSGGCGG FDVAMAQDPT VSLWEKKESV KKQKLQLLEQ RVSIQAQAFE  360
LEKQRFKWLR YCSKKDREFE RLRLENERMR LENEQSILQL RQKQLEMDFR SSKTSRDPTS  420
LGVDKMQARD QIDLGRHQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-70	Trihelix family protein