PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021645160.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

TCP

Protein Properties

Length: 382aa MW: 40874.4 Da PI: 9.6854

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021645160.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	125	8.3e-39	44	147	2	103
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaa 95 ++k+ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d+ tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s++++ +++ XP_021645160.1 44 PTKRISTKDRHTKVEGRGRRIRMPATCAARVFQLTRELGHKSDGATIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSISASHHLRNTY 138 678999***************************************************************99987777777777555554444444 PP TCP 96 .kskksqks 103 +++++ ++ XP_021645160.1 139 lNPNFTVHQ 147 455444444 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MNPENGIRSK PNFPLQLLEK KHHLQEPQPD HQPSSSSNPP KKPPTKRIST KDRHTKVEGR 60 GRRIRMPATC AARVFQLTRE LGHKSDGATI EWLLQQAEPA VIAATGTGTI PANFTSLNIS 120 LRSSGSSISA SHHLRNTYLN PNFTVHQQLR IRNELERNIV VDEASQQQRR ILFPSDNSLS 180 FSSINSTNNV GGNLNTAVAL QGSAANKQEV RGGGDTSCLD VTDGETSLGS KRRPEHELGH 240 QMGSYLMQST STGAIPTTHS PIPSTFWMAS NNPSSSNQVI TGDPMVTFPY FSASTNMYRG 300 SMSGGLHFMN FPAPMALLPG QQLGSAMSGG DGGSSTVTES HLGVLAAFNA YRPIMGGGGA 360 TESPVSGSNP HNGGEDGHNT RS

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MNPENGIRSK PNFPLQLLEK KHHLQEPQPD HQPSSSSNPP KKPPTKRIST KDRHTKVEGR  60
GRRIRMPATC AARVFQLTRE LGHKSDGATI EWLLQQAEPA VIAATGTGTI PANFTSLNIS  120
LRSSGSSISA SHHLRNTYLN PNFTVHQQLR IRNELERNIV VDEASQQQRR ILFPSDNSLS  180
FSSINSTNNV GGNLNTAVAL QGSAANKQEV RGGGDTSCLD VTDGETSLGS KRRPEHELGH  240
QMGSYLMQST STGAIPTTHS PIPSTFWMAS NNPSSSNQVI TGDPMVTFPY FSASTNMYRG  300
SMSGGLHFMN FPAPMALLPG QQLGSAMSGG DGGSSTVTES HLGVLAAFNA YRPIMGGGGA  360
TESPVSGSNP HNGGEDGHNT RS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	4e-42	TCP family protein