PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021645021.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB | ||||||||
Protein Properties | Length: 314aa MW: 35163.2 Da PI: 6.9876 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.3 | 4e-19 | 28 | 75 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd llv++++++G g+W++ a++ g++Rt+k+c++rw++yl XP_021645021.1 28 RGPWTLEEDNLLVHYIARHGEGRWNLLAKCAGLRRTGKSCRLRWLNYL 75 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.3 | 6.4e-17 | 81 | 124 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T++E++l++d++ ++G++ W++Ia++++ gRt++++k++w++ XP_021645021.1 81 RGNLTPQEQLLILDLHSKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 124 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 314 aa Download sequence |
MSSVSSSSLS KKSLSSSSDD DSSDKLRRGP WTLEEDNLLV HYIARHGEGR WNLLAKCAGL 60 RRTGKSCRLR WLNYLKPDVK RGNLTPQEQL LILDLHSKWG NRWSKIAQHL PGRTDNEIKN 120 YWRTRVQKQA RHLKVDANST AFQDIIKCFW IPRLLQKIEG SSTSCSSTST SSSSTILSQN 180 PTVVSDQPVN YSAHDLPFPI PPPQLPQEVS GNLQGNLDHN SDSEHGSNSC ISSTESMNIS 240 QISQLSEYPT SPFHPISTFQ KDCYYVDSGC YNMESMTPAT LSVPAGVFQN VAESNWVGYD 300 FGDNIWSMDE LMAI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68320.1 | 5e-78 | MYB family protein |