PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021645020.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 320aa MW: 35818 Da PI: 6.7801

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021645020.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.9	4.9e-18	28	81	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT......TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg......kgRtlkqcksrwqkyl 48 rg+WT eEd llv++++++G g+W++ a++ g ++Rt+k+c++rw++yl XP_021645020.1 28 RGPWTLEEDNLLVHYIARHGEGRWNLLAKCAGnqellgLRRTGKSCRLRWLNYL 81 89**************************************************97 PP
2	Myb_DNA-binding	53.3	6.6e-17	87	130	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T++E++l++d++ ++G++ W++Ia++++ gRt++++k++w++ XP_021645020.1 87 RGNLTPQEQLLILDLHSKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 130 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MSSVSSSSLS KKSLSSSSDD DSSDKLRRGP WTLEEDNLLV HYIARHGEGR WNLLAKCAGN 60 QELLGLRRTG KSCRLRWLNY LKPDVKRGNL TPQEQLLILD LHSKWGNRWS KIAQHLPGRT 120 DNEIKNYWRT RVQKQARHLK VDANSTAFQD IIKCFWIPRL LQKIEGSSTS CSSTSTSSSS 180 TILSQNPTVV SDQPVNYSAH DLPFPIPPPQ LPQEVSGNLQ GNLDHNSDSE HGSNSCISST 240 ESMNISQISQ LSEYPTSPFH PISTFQKDCY YVDSGCYNME SMTPATLSVP AGVFQNVAES 300 NWVGYDFGDN IWSMDELMAI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68320.1	2e-75	MYB family protein