PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021644844.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HSF

Protein Properties

Length: 564aa MW: 63729.1 Da PI: 4.5398

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021644844.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.3	6.7e-35	129	220	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d++l+ +isw ++g+sfvv+d+ efa+ +Lp+ Fkh+nf+SFvRQLn+YgF+k+++++ weF+++ F++g+++ll++ XP_021644844.1 129 FLSKTYDLVNDRTLDPIISWGTTGESFVVWDPVEFARVILPRNFKHNNFSSFVRQLNTYGFRKIDSDK---------WEFANEAFRRGERRLLKN 214 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+ks XP_021644844.1 215 IQRRKS 220 **98 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
MVPEEEKSPK SPRKPSDSSS TSESEATPSL LQPLMGSRLF PTMEDLSYSE SPLSAPIPYP 60 LMEFGAFSVI EQSVYSPSEI FEFKTNPISE TERAPTELAS GVYTGDYAEE NIGMPHPLAS 120 LQENPMPPFL SKTYDLVNDR TLDPIISWGT TGESFVVWDP VEFARVILPR NFKHNNFSSF 180 VRQLNTYGFR KIDSDKWEFA NEAFRRGERR LLKNIQRRKS PQSRQFASYT GPSTEVGKSE 240 LEREIERLSE ERSMMMQEVV ELHQEQHGAV HHMEAVRQRL QGAEQRQKQM ISFLVKLFQN 300 PAFLARLRQN KKQGDIGSSR MKRKFVEQQH HEPGQSESPM EGQIVRYRPE WTNLSSSAVV 360 PDVNPAPVEQ TPDYILQEMV EMGKDVEGMA FQLENVPSNE FAMSDELAMA QGYIKTPEQF 420 QEGKSNLGSE DPQIKGKNVI SPEQEVAPEY FVSFPEVLAT EKNFLEFSCT GIESIMKQED 480 VWSMGFDNQA GMSSSSQELW GNLVNYDVPE LGSTGGFSDI WDLGSAQVAG SSGIQKWPAD 540 ENPVEQPESH ASQKKDDKSK NLDQ

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

MVPEEEKSPK SPRKPSDSSS TSESEATPSL LQPLMGSRLF PTMEDLSYSE SPLSAPIPYP  60
LMEFGAFSVI EQSVYSPSEI FEFKTNPISE TERAPTELAS GVYTGDYAEE NIGMPHPLAS  120
LQENPMPPFL SKTYDLVNDR TLDPIISWGT TGESFVVWDP VEFARVILPR NFKHNNFSSF  180
VRQLNTYGFR KIDSDKWEFA NEAFRRGERR LLKNIQRRKS PQSRQFASYT GPSTEVGKSE  240
LEREIERLSE ERSMMMQEVV ELHQEQHGAV HHMEAVRQRL QGAEQRQKQM ISFLVKLFQN  300
PAFLARLRQN KKQGDIGSSR MKRKFVEQQH HEPGQSESPM EGQIVRYRPE WTNLSSSAVV  360
PDVNPAPVEQ TPDYILQEMV EMGKDVEGMA FQLENVPSNE FAMSDELAMA QGYIKTPEQF  420
QEGKSNLGSE DPQIKGKNVI SPEQEVAPEY FVSFPEVLAT EKNFLEFSCT GIESIMKQED  480
VWSMGFDNQA GMSSSSQELW GNLVNYDVPE LGSTGGFSDI WDLGSAQVAG SSGIQKWPAD  540
ENPVEQPESH ASQKKDDKSK NLDQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03720.1	5e-95	HSF family protein