PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021644503.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WRKY

Protein Properties

Length: 460aa MW: 50132.2 Da PI: 5.1911

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021644503.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.7	7.5e-31	238	296	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ XP_021644503.1 238 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 296 699**********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
MCSFFGLEMD NYRGDLTDIV RASAGALGQS DIAPVSKWEF PSDPLNLSSS STAMEDNRDS 60 VFGDPFCNMR DPLLHEFNVP AGSGYYSSPN STDHMLSTSL DDTSNDFSGA NSSNILAHKV 120 FEEEMNKNPH NIFSRIQISQ NNPTKLPVSP CDSPVLAAAS ASASSSSPRG FKSSSMVSID 180 MINTNSSKAC LIDNAGPVQI SSPRSLGIKR RKSQAKKVVC IPAPAAANSR PGGEVVPSDL 240 WAWRKYGQKP IKGSPYPRGY YRCSSSKGCS ARKQVERSRT DPNMLVITYT SEHNHPWPTQ 300 RNALAGSTRS QPLKNNASAS KSSSSSQAQK TTNTKEEQKE SNNDTLSPTM VCGSSTASAA 360 VKEETEDLEN QMEMDDTDQF SEGFPYRPAI HADSNQSECF FADLEGIEAD PIDLLFSQGF 420 TGDEQKASKA LDPFCFFDWS WDANTNTNNN ISFGEAKRRL

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

MCSFFGLEMD NYRGDLTDIV RASAGALGQS DIAPVSKWEF PSDPLNLSSS STAMEDNRDS  60
VFGDPFCNMR DPLLHEFNVP AGSGYYSSPN STDHMLSTSL DDTSNDFSGA NSSNILAHKV  120
FEEEMNKNPH NIFSRIQISQ NNPTKLPVSP CDSPVLAAAS ASASSSSPRG FKSSSMVSID  180
MINTNSSKAC LIDNAGPVQI SSPRSLGIKR RKSQAKKVVC IPAPAAANSR PGGEVVPSDL  240
WAWRKYGQKP IKGSPYPRGY YRCSSSKGCS ARKQVERSRT DPNMLVITYT SEHNHPWPTQ  300
RNALAGSTRS QPLKNNASAS KSSSSSQAQK TTNTKEEQKE SNNDTLSPTM VCGSSTASAA  360
VKEETEDLEN QMEMDDTDQF SEGFPYRPAI HADSNQSECF FADLEGIEAD PIDLLFSQGF  420
TGDEQKASKA LDPFCFFDWS WDANTNTNNN ISFGEAKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30650.1	1e-111	WRKY family protein