PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021643774.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

TCP

Protein Properties

Length: 420aa MW: 44776.6 Da PI: 7.1813

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021643774.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	130.5	1.7e-40	89	181	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....k 89 ++ k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pai+++tgt++++a+++ ++s +ss+ + s++ + XP_021643774.1 89 PTTKRPSKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFStLNVSLRSSGTTISAPasksA 181 5789*****************************************************************999777777777774444333220 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MVLMESQSNN QENIKSSSKD HHGQKQESAA SLQLVSLENQ SSQLQQHGST AATATITSTA 60 QGPFMGSISN QITVHPSTSN SNSAALTKPT TKRPSKDRHT KVDGRGRRIR MPALCAARVF 120 QLTRELGHKS DGETIEWLLQ QAEPAIIAAT GTGTIPANFS TLNVSLRSSG TTISAPASKS 180 APLSFHSGLA FYDANNNNGG ENRRVIGSNT TMLGFHHQLY PQTLVSDENY MRIKTYREDL 240 FKETTAASTT QQESTEPVNP TSNNKPPIAA ARTGVQDHFH QELGSIRPSN ILATPAMWAV 300 APAATNGSNA FWMLPVGGTT TTTAAMPEPQ MWTFPAAGVT PMQRVNFSGG GRVSPVQLGS 360 MMVQQQLGLG VAESNMGILG GGADAYNSSR VGLGMNIEQH NQENQQQGSD SGDENPTDSQ

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MVLMESQSNN QENIKSSSKD HHGQKQESAA SLQLVSLENQ SSQLQQHGST AATATITSTA  60
QGPFMGSISN QITVHPSTSN SNSAALTKPT TKRPSKDRHT KVDGRGRRIR MPALCAARVF  120
QLTRELGHKS DGETIEWLLQ QAEPAIIAAT GTGTIPANFS TLNVSLRSSG TTISAPASKS  180
APLSFHSGLA FYDANNNNGG ENRRVIGSNT TMLGFHHQLY PQTLVSDENY MRIKTYREDL  240
FKETTAASTT QQESTEPVNP TSNNKPPIAA ARTGVQDHFH QELGSIRPSN ILATPAMWAV  300
APAATNGSNA FWMLPVGGTT TTTAAMPEPQ MWTFPAAGVT PMQRVNFSGG GRVSPVQLGS  360
MMVQQQLGLG VAESNMGILG GGADAYNSSR VGLGMNIEQH NQENQQQGSD SGDENPTDSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72010.1	9e-71	TCP family protein