PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021643608.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 352aa MW: 39087 Da PI: 8.8617

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021643608.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.9	2.1e-09	176	223	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_021643608.1 176 SHSLAERVRREKISERMKILQRLVPGC----DKVTGKALMLDEIINYVQSLQ 223 8***********************9....555***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MAAFSYQHHP FRLDSVFLPN TPIKNLSGFM EEGNINTNCF SQFYPSKLPL QTPLDVRFHD 60 TSLLDHSSML APSDNEPSVT KKQGTDSSTV VDKPESGEQV TQKLPPMDKK RKHANGSSLN 120 SAQSKDARDG RSMKQKKRNS ELKEEDKRPK AEKKVPEGPP TGYIHVRARR GQATDSHSLA 180 ERVRREKISE RMKILQRLVP GCDKVTGKAL MLDEIINYVQ SLQNQVEFLS MKLASVNPLF 240 YDFGMDLDAL MVRSEGLSRL ASSLPPRQQC TPTQPADFAN AASANNTTAT ATATATFAYP 300 LFDSSSASLL VQGQMSSDFI HQDSGSLLWG VDEQRQKFLN PSGFSNNLCS FH

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MAAFSYQHHP FRLDSVFLPN TPIKNLSGFM EEGNINTNCF SQFYPSKLPL QTPLDVRFHD  60
TSLLDHSSML APSDNEPSVT KKQGTDSSTV VDKPESGEQV TQKLPPMDKK RKHANGSSLN  120
SAQSKDARDG RSMKQKKRNS ELKEEDKRPK AEKKVPEGPP TGYIHVRARR GQATDSHSLA  180
ERVRREKISE RMKILQRLVP GCDKVTGKAL MLDEIINYVQ SLQNQVEFLS MKLASVNPLF  240
YDFGMDLDAL MVRSEGLSRL ASSLPPRQQC TPTQPADFAN AASANNTTAT ATATATFAYP  300
LFDSSSASLL VQGQMSSDFI HQDSGSLLWG VDEQRQKFLN PSGFSNNLCS FH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	109	136	KKRKHANGSSLNSAQSKDARDGRSMKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	2e-61	bHLH family protein