PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021643194.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WRKY

Protein Properties

Length: 421aa MW: 46886.4 Da PI: 5.7172

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021643194.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.3	1e-30	208	266	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+vers++dp+++++ Y+geH+h+ XP_021643194.1 208 NDVWAWRKYGQKPIKGSPYPRNYYRCSSSkGCVARKQVERSNTDPNMFIVSYTGEHTHP 266 8************************998**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MLSMAEDWDL YAIVRSCTTS AANTAGAATS NIDTSSQNAN FENHLYCLAS LTFEDDDPFS 60 FPDLEQPRNK GWQELQDSYK PFLSTTTVQG NIRSSSSIFE FGGFSGQDQS QLAQQQQQLH 120 HPPPPPPQPT NMPFSLRFNH SQPQSQHAQQ QQKQNQWPKL HQLGSQRPET SASLLPLRTT 180 QSSASRSRKK KSHQKRQVMQ VTAENLCNDV WAWRKYGQKP IKGSPYPRNY YRCSSSKGCV 240 ARKQVERSNT DPNMFIVSYT GEHTHPRPTH RNSLAGSTRN KFPAIQKPPN KEAEEPSAEK 300 DPCSSPLSAT SVSPTTPLSA PMDHETANEN INTDAAKMDG ADMEGHRMES DDEFDEGDDD 360 ILIPNMTFNE DLIKDLQELG TVGEGRFRIH SSSSEGLGHT LDFDDNFSSW FVGSSAVVGG 420 D

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MLSMAEDWDL YAIVRSCTTS AANTAGAATS NIDTSSQNAN FENHLYCLAS LTFEDDDPFS  60
FPDLEQPRNK GWQELQDSYK PFLSTTTVQG NIRSSSSIFE FGGFSGQDQS QLAQQQQQLH  120
HPPPPPPQPT NMPFSLRFNH SQPQSQHAQQ QQKQNQWPKL HQLGSQRPET SASLLPLRTT  180
QSSASRSRKK KSHQKRQVMQ VTAENLCNDV WAWRKYGQKP IKGSPYPRNY YRCSSSKGCV  240
ARKQVERSNT DPNMFIVSYT GEHTHPRPTH RNSLAGSTRN KFPAIQKPPN KEAEEPSAEK  300
DPCSSPLSAT SVSPTTPLSA PMDHETANEN INTDAAKMDG ADMEGHRMES DDEFDEGDDD  360
ILIPNMTFNE DLIKDLQELG TVGEGRFRIH SSSSEGLGHT LDFDDNFSSW FVGSSAVVGG  420
D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	189	193	KKKSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52830.1	1e-51	WRKY family protein