PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021642843.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 490aa MW: 54049.5 Da PI: 7.4109

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021642843.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.6	4.3e-16	70	114	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT++E++++++a k++G W++I +++g ++t+ q++s+ qk+ XP_021642843.1 70 RERWTEDEHKKFLEALKLYGRA-WRRIEEHVG-TKTAVQIRSHAQKF 114 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MVGGLVVCAA MTVQDQCGGT LSNASLPAGN GILLNGGLHT VTATQLKDQF TCGNDYSPKV 60 RKPYTITKQR ERWTEDEHKK FLEALKLYGR AWRRIEEHVG TKTAVQIRSH AQKFFSKVVR 120 EATGNNTSSV EPVEIPPPRP KRKPMHPYPR KMAHPLNKEP SIPEQPLQSS SPNFSISEQE 180 NQSPTSVLSA VGSDAFGSID SNTPNSSLSP VSCAGGSHPA DFTIYEPNLT PADHGCPSPA 240 TITAAALDEQ SPKVQKLNLF PIENVFSEDV LMRETSTRSL KLFGRTVLVT ECHRPSSPTI 300 GNSKLPPLDA NDGKHVQPLP WDFMATELQH ENRECAWSHL STHGLPGTLY YQQFQKEKSN 360 STGAGSATPL PLYAFCGDIP FPSHGQEPVK LHLDSNGEEI QDKEIHKEGS WTRSNSGSVN 420 EGENVDKNVD GETQSRQYRV LELKTSEKSA SSSKYMKGFV PYKKRTAERD SRSSTITGEE 480 REEQRIRLCL

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MVGGLVVCAA MTVQDQCGGT LSNASLPAGN GILLNGGLHT VTATQLKDQF TCGNDYSPKV  60
RKPYTITKQR ERWTEDEHKK FLEALKLYGR AWRRIEEHVG TKTAVQIRSH AQKFFSKVVR  120
EATGNNTSSV EPVEIPPPRP KRKPMHPYPR KMAHPLNKEP SIPEQPLQSS SPNFSISEQE  180
NQSPTSVLSA VGSDAFGSID SNTPNSSLSP VSCAGGSHPA DFTIYEPNLT PADHGCPSPA  240
TITAAALDEQ SPKVQKLNLF PIENVFSEDV LMRETSTRSL KLFGRTVLVT ECHRPSSPTI  300
GNSKLPPLDA NDGKHVQPLP WDFMATELQH ENRECAWSHL STHGLPGTLY YQQFQKEKSN  360
STGAGSATPL PLYAFCGDIP FPSHGQEPVK LHLDSNGEEI QDKEIHKEGS WTRSNSGSVN  420
EGENVDKNVD GETQSRQYRV LELKTSEKSA SSSKYMKGFV PYKKRTAERD SRSSTITGEE  480
REEQRIRLCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	4e-73	MYB_related family protein