PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021642687.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

TCP

Protein Properties

Length: 361aa MW: 38169.6 Da PI: 9.4926

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021642687.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	119.2	5.1e-37	78	179	2	104
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaak 96 ++k+ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai++ tgt++ +a ++ +++ + + ss+++++s+++ XP_021642687.1 78 PPKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIATTGTGTVPAIAM-SVNGTLKIPTTSSTNSEPSDPS 171 789*************************************************************88888444.2222222222233333333332 PP TCP 97 skksqksa 104 kk++k++ XP_021642687.1 172 IKKKRKRP 179 22222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MATIIQKQEL EEDDETGNVD LRISGAGDAH PDKVDPTAKE VALKEEPDSE DRSPARLGVM 60 PVAVHVPTAI RMPLAAAPPK RASTKDRHTK VEGRGRRIRM PATCAARIFQ LTRELGHKSD 120 GETIRWLLEH AEPAIIATTG TGTVPAIAMS VNGTLKIPTT SSTNSEPSDP SIKKKRKRPA 180 NSEYIDISDA AVSVSAPLAP IITQPQTPPP PPQPPQQAAT AVVPQGLVPM WAIPSNAVVP 240 GAFFMVPPMA ASIAGPPNQP QIFTFPAAAT PLINISARPI SSFVSSMQQA ANIAVAMPVS 300 SSTVSGSKPA KATSVMAPSS SSAPISSTTT TSTTTTQMLR DFSLEIYDKQ ELQFMTRSSK 360 H

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MATIIQKQEL EEDDETGNVD LRISGAGDAH PDKVDPTAKE VALKEEPDSE DRSPARLGVM  60
PVAVHVPTAI RMPLAAAPPK RASTKDRHTK VEGRGRRIRM PATCAARIFQ LTRELGHKSD  120
GETIRWLLEH AEPAIIATTG TGTVPAIAMS VNGTLKIPTT SSTNSEPSDP SIKKKRKRPA  180
NSEYIDISDA AVSVSAPLAP IITQPQTPPP PPQPPQQAAT AVVPQGLVPM WAIPSNAVVP  240
GAFFMVPPMA ASIAGPPNQP QIFTFPAAAT PLINISARPI SSFVSSMQQA ANIAVAMPVS  300
SSTVSGSKPA KATSVMAPSS SSAPISSTTT TSTTTTQMLR DFSLEIYDKQ ELQFMTRSSK  360
H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	1e-88	TCP family protein