PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021642550.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 682aa    MW: 77584 Da    PI: 6.3874
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021642550.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS366.92.8e-1123096783374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +lL +cA av+s+d+++aq+ L ++++ +sp+gd +qRla++f+++L+arla++++  y  + +s+ts    ++ l+a+++++ ++P+ ++s+l 
  XP_021642550.1 309 TLLPQCALAVASDDQRAAQEQLRQVKQYSSPYGDGNQRLAHFFANGLEARLAGTGTPGYTPVVSSTTS---AADMLKAYHTYVTACPFQTMSYLY 400
                     6899*************************************************999999998888888...9*********************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     aNq+I++ +e+ +r+HiiD++i +G+QWp+L++ L++R++gpp+l iTg++ p++g   +e++eetg+rL+k++e+++vpfe+n+ +a+++e+++
  XP_021642550.1 401 ANQTIMKLAEKVTRLHIIDYGILYGFQWPSLIERLSTRSGGPPKLCITGIEFPQPGfrPAERVEETGHRLRKYCERFNVPFEYNA-IAQKWESIQ 494
                     *******************************************************9*****************************.7******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     +e+++++++E+++Vn+ ++l++l+d+++  +s rd vLk++++++P+++++   +  +n++ Fl+rf +al ++salfd+++a++pre+ +r + 
  XP_021642550.1 495 YEDFKIDRNEMVVVNCLYRLKNLPDDTMVANSVRDIVLKQMRRINPDIFIHGVVNGTYNAPFFLTRFRDALFHFSALFDMIDATIPREEPARLMF 589
                     *********************************************************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     E+e++gr ++nv+aceg +r+er et+++W+ r  +aGF+++pl+++++kq+ + ++  +++ + v+e+s ++++gWk+r ++++S+W+
  XP_021642550.1 590 EKEIFGRYAMNVIACEGGDRVERPETYRQWQVRNVKAGFRQLPLDQEITKQVTATVESNYNKNFVVDEDSRWMLQGWKGRIVYALSVWK 678
                     ************************************************************999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 682 aa     Download sequence    
MDDALLRAPP GARTRFRFDC GTMSALPNHY LVNGFELNHE YVDPHPHQLP TNAHTSSRDS  60
ASHSGSSPEA DSLDNSDFSN SVLKYISDML MEEELESKNC MLHEGLALQA AEKSFYDVLG  120
QKYPPWSDQS SNFHQNIHSL GSAFTWSASS DSSNTCSTSI NLVESSWIFD HAEFEFSHVN  180
TLQVPDLCSQ SFSNASSLIP SDFQEKDNTR DYYSFNGLRE RKLHQFEESA YLEGRSNKHS  240
AISLEKPEET EIFDEVLLGQ TGKNDSGSFS LQKNDEGKLK NNGQTKGSIG RKCRSKKKGS  300
KKEVVDLWTL LPQCALAVAS DDQRAAQEQL RQVKQYSSPY GDGNQRLAHF FANGLEARLA  360
GTGTPGYTPV VSSTTSAADM LKAYHTYVTA CPFQTMSYLY ANQTIMKLAE KVTRLHIIDY  420
GILYGFQWPS LIERLSTRSG GPPKLCITGI EFPQPGFRPA ERVEETGHRL RKYCERFNVP  480
FEYNAIAQKW ESIQYEDFKI DRNEMVVVNC LYRLKNLPDD TMVANSVRDI VLKQMRRINP  540
DIFIHGVVNG TYNAPFFLTR FRDALFHFSA LFDMIDATIP REEPARLMFE KEIFGRYAMN  600
VIACEGGDRV ERPETYRQWQ VRNVKAGFRQ LPLDQEITKQ VTATVESNYN KNFVVDEDSR  660
WMLQGWKGRI VYALSVWKPV RD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.10.0GRAS family protein