PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021642379.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

NAC

Protein Properties

Length: 358aa MW: 40125.4 Da PI: 8.1714

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021642379.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	177.1	4.7e-55	16	142	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL kkv + +++ ++i +vd++k+ePw+Lp k+k +ekewyfF+ rd+ky+tg r+nrat++gyWkatgkdke+++ XP_021642379.1 16 LPPGFRFHPTDEELISQYLYKKVLDINFSS-KAIGDVDLNKSEPWELPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYR- 108 79***********************999.88***********888999************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 +++lvg+kktLvfykgrapkgekt+Wv+heyrle XP_021642379.1 109 GKSLVGMKKTLVFYKGRAPKGEKTNWVIHEYRLE 142 999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MENISGLVTE DDQMDLPPGF RFHPTDEELI SQYLYKKVLD INFSSKAIGD VDLNKSEPWE 60 LPWKAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT GKDKEIYRGK SLVGMKKTLV 120 FYKGRAPKGE KTNWVIHEYR LEGKFSVHNL PKTAKNEWVI CRVFQKSSGG KKTHISGLVR 180 LGSFGSELGP SGLPPLMDSS PYSSKTKPLA ESAYVPCFSN STDVQRNQQE SIDGFNNNPF 240 AVSSSPADIY PRIPLPNSFY PAQTVPFPAN MQYPGSVLMQ DQSILRALSQ GSNLKQSFKT 300 ERAMVNASQD TGLTTDMNTE ISSVISNLEM GKRGFEDQEA PSTSAGPVDL DCLWNFCN

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MENISGLVTE DDQMDLPPGF RFHPTDEELI SQYLYKKVLD INFSSKAIGD VDLNKSEPWE  60
LPWKAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT GKDKEIYRGK SLVGMKKTLV  120
FYKGRAPKGE KTNWVIHEYR LEGKFSVHNL PKTAKNEWVI CRVFQKSSGG KKTHISGLVR  180
LGSFGSELGP SGLPPLMDSS PYSSKTKPLA ESAYVPCFSN STDVQRNQQE SIDGFNNNPF  240
AVSSSPADIY PRIPLPNSFY PAQTVPFPAN MQYPGSVLMQ DQSILRALSQ GSNLKQSFKT  300
ERAMVNASQD TGLTTDMNTE ISSVISNLEM GKRGFEDQEA PSTSAGPVDL DCLWNFCN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-169	NAC family protein