PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021642294.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

NAC

Protein Properties

Length: 570aa MW: 64433.5 Da PI: 5.3933

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021642294.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	158.5	2.8e-49	9	151	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.................kvkaeekewyfFskrdkkyatgkrknrat 78 lp GfrF+Ptdeelv++yL+ k++g++ e+ +vi+e+d++k+ePwdLp +++++++ew+fF++ d+ky++g+r nrat XP_021642294.1 9 LPLGFRFRPTDEELVNFYLRLKINGNDEEV-KVIRELDVCKWEPWDLPGifyfwlsflftlpslyiHIYKNDQEWFFFCPLDRKYPSGHRLNRAT 102 699**********************999.99***********5689******99998888999****************** PP NAM 79 ksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++gyWkatgkd++++s +++l+g+kktLvfy+grap+g++t+Wv+heyr+ XP_021642294.1 103 SKGYWKATGKDRKIKS-GNNLIGMKKTLVFYTGRAPRGTRTHWVIHEYRA 151 ************.999**************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 570 aa Download sequence
MAVLSFSSLP LGFRFRPTDE ELVNFYLRLK INGNDEEVKV IRELDVCKWE PWDLPGIFYF 60 WLSFLFTLPS LYIHIYKNDQ EWFFFCPLDR KYPSGHRLNR ATSKGYWKAT GKDRKIKSGN 120 NLIGMKKTLV FYTGRAPRGT RTHWVIHEYR AVEDDLDGTK PGQSPFVICR LFKKQDDSVE 180 GLNSEEPEAT ISSPTVAQSF PEVAESELAL PQPSPVNTPA SNILPSNECF NAFQSGGQTV 240 DVTTPEGDSQ LEEYLNWFVQ PPDTVYDKLF SPLHAQVQAE VGFPHYSIAN DWSNCNSGVQ 300 SHHGTNEIDS AYVTNFLDDV LPQYSCKEYG SIKNFAFDEF PESYGGLDAK VNQALLEEEL 360 QGTVYPEEDI DKKLPLVVET IQEDRLLTFD HGVESYRRQS FTSISGAEQL TSFKEISDHR 420 NQIGSSESVG TGIRIRARSP QNVPNLWNSA TQGLATRRLR LQCKLQELKA MEKDTFVGGC 480 SCSTKDEHEH KTRSLSESNE VGVSEELMRY QGPNVSLRSH TSMHQKVPSM LKASSAHCSI 540 WSIAVFGVVV LVILPLISVS KWRCLIFETA

Sequence ? help Back to Top

Protein Sequence Length: 570 aa Download sequence

MAVLSFSSLP LGFRFRPTDE ELVNFYLRLK INGNDEEVKV IRELDVCKWE PWDLPGIFYF  60
WLSFLFTLPS LYIHIYKNDQ EWFFFCPLDR KYPSGHRLNR ATSKGYWKAT GKDRKIKSGN  120
NLIGMKKTLV FYTGRAPRGT RTHWVIHEYR AVEDDLDGTK PGQSPFVICR LFKKQDDSVE  180
GLNSEEPEAT ISSPTVAQSF PEVAESELAL PQPSPVNTPA SNILPSNECF NAFQSGGQTV  240
DVTTPEGDSQ LEEYLNWFVQ PPDTVYDKLF SPLHAQVQAE VGFPHYSIAN DWSNCNSGVQ  300
SHHGTNEIDS AYVTNFLDDV LPQYSCKEYG SIKNFAFDEF PESYGGLDAK VNQALLEEEL  360
QGTVYPEEDI DKKLPLVVET IQEDRLLTFD HGVESYRRQS FTSISGAEQL TSFKEISDHR  420
NQIGSSESVG TGIRIRARSP QNVPNLWNSA TQGLATRRLR LQCKLQELKA MEKDTFVGGC  480
SCSTKDEHEH KTRSLSESNE VGVSEELMRY QGPNVSLRSH TSMHQKVPSM LKASSAHCSI  540
WSIAVFGVVV LVILPLISVS KWRCLIFETA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24590.2	3e-97	NAC family protein