PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021641956.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB | ||||||||
Protein Properties | Length: 245aa MW: 27619.3 Da PI: 7.7528 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.6 | 2.9e-18 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT +Ed+ll ++v+ +G g W ++a++ g++R++k+c++rw++yl XP_021641956.1 13 RGAWTSDEDQLLREYVRNHGEGKWGKVAKETGLKRCGKSCRLRWLNYL 60 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.7 | 9.6e-17 | 66 | 110 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T++E++l+++++k+lG++ W++Ia +++ gRt++++k++w++ XP_021641956.1 66 RGNITEDEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNST 110 7999******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MGRNPCPEGR LNRGAWTSDE DQLLREYVRN HGEGKWGKVA KETGLKRCGK SCRLRWLNYL 60 RPGIKRGNIT EDEEDLIIRL HKLLGNRWSL IAGRLPGRTD NEIKNYWNST LRKKIEDKSK 120 PSKNEDKKTI KGTCSTMVMK LGSCTDTPPQ QNNVTNITGL VIEPSVSKER NNLLMKNMIE 180 ESDSDECLLP IASSCDWDLM LDLNGEQISL SDFLHTDFSN IIHVDGSSPS SSAEAAFLSE 240 AVLRN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35550.1 | 8e-57 | MYB family protein |