PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021641138.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WRKY

Protein Properties

Length: 351aa MW: 39619.1 Da PI: 4.6746

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021641138.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	93.2	2e-29	124	183	2	58
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 +DgynWrKYGqK++ g++fpr+YYrCt++ gC ++k+v++s++dp+++e+tY+g+H++ XP_021641138.1 124 EDGYNWRKYGQKDILGANFPRGYYRCTHRhsqGCLATKQVQKSDQDPTIFEVTYRGRHTC 183 8*************************98999***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MDCEQKTLIT ELTQGKELAE LLRNNLNSIS SLDTRQFLVE QILSSYEKAL FLLNWGGCAV 60 EIKPTISTLE SPNYFANSSP KSDVSDQDCK DQCQKDVYKK RKTEPRWTEQ VKVCSVTGLE 120 GPLEDGYNWR KYGQKDILGA NFPRGYYRCT HRHSQGCLAT KQVQKSDQDP TIFEVTYRGR 180 HTCLQASRLA VALSPASLKN DKSKQDKDSC QVEQPEQKPK PLKELSFNFR EEVKSQDSNN 240 VEDIFPLFSF PDAYIGNGNE ENDIFKESMM ENDFLSSLSS AFISPATSDS SCFAMTPCHM 300 NSLGIDHNVR TPESNLAPTS ATNSPNGYWD ISLDNVDFDT NFPLDNPELF T

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MDCEQKTLIT ELTQGKELAE LLRNNLNSIS SLDTRQFLVE QILSSYEKAL FLLNWGGCAV  60
EIKPTISTLE SPNYFANSSP KSDVSDQDCK DQCQKDVYKK RKTEPRWTEQ VKVCSVTGLE  120
GPLEDGYNWR KYGQKDILGA NFPRGYYRCT HRHSQGCLAT KQVQKSDQDP TIFEVTYRGR  180
HTCLQASRLA VALSPASLKN DKSKQDKDSC QVEQPEQKPK PLKELSFNFR EEVKSQDSNN  240
VEDIFPLFSF PDAYIGNGNE ENDIFKESMM ENDFLSSLSS AFISPATSDS SCFAMTPCHM  300
NSLGIDHNVR TPESNLAPTS ATNSPNGYWD ISLDNVDFDT NFPLDNPELF T

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	94	102	QKDVYKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11070.1	5e-43	WRKY family protein