PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021640141.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

TCP

Protein Properties

Length: 395aa MW: 42137.9 Da PI: 9.501

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021640141.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	131.3	9.1e-41	54	158	2	104
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaa 95 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s++++ +++ XP_021640141.1 54 PPKRTSTKDRHTKVEGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSISASHHLRNTY 148 789******************************************************************99976666666666444443333332 PP TCP 96 .kskksqksa 104 +++++ +++ XP_021640141.1 149 fNPNFAVHQQ 158 2333333322 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MIMDPENGIR SSRPNFPLQL LEKKQEQLLP PPPPPPPPDR QPSSSSSNPA KKPPPKRTST 60 KDRHTKVEGR GRRIRMPATC AARVFQLTRE LGHKSDGETI EWLLQQAEPA VIAATGTGTI 120 PANFTSLNIS LRSSGSSISA SHHLRNTYFN PNFAVHQQLR SRSEWERNIV VDEASSASQQ 180 HRRILFPPDD SLSFNSISSS NNNVGGNLNT SVVLHGSPAN KQVRGGGDTS CLDVTDGETS 240 LGRKRRPEHE LGHQMGSYLL QSTSTGPIPT THSPIPATFW MVSNPSNNQV ISGDPMATFP 300 SFSASPNIYR GSMSGGLHFM NFPSPMAFLP GQQLGSAISG SGSGGGTSIV TESHLGVMAA 360 LNAYRPIMGS GGASESLASG SNPHHGGEDG QDTTI

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MIMDPENGIR SSRPNFPLQL LEKKQEQLLP PPPPPPPPDR QPSSSSSNPA KKPPPKRTST  60
KDRHTKVEGR GRRIRMPATC AARVFQLTRE LGHKSDGETI EWLLQQAEPA VIAATGTGTI  120
PANFTSLNIS LRSSGSSISA SHHLRNTYFN PNFAVHQQLR SRSEWERNIV VDEASSASQQ  180
HRRILFPPDD SLSFNSISSS NNNVGGNLNT SVVLHGSPAN KQVRGGGDTS CLDVTDGETS  240
LGRKRRPEHE LGHQMGSYLL QSTSTGPIPT THSPIPATFW MVSNPSNNQV ISGDPMATFP  300
SFSASPNIYR GSMSGGLHFM NFPSPMAFLP GQQLGSAISG SGSGGGTSIV TESHLGVMAA  360
LNAYRPIMGS GGASESLASG SNPHHGGEDG QDTTI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	6e-41	TCP family protein