PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021639806.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | GRAS | ||||||||
Protein Properties | Length: 529aa MW: 59003.6 Da PI: 4.5278 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 367 | 2.6e-112 | 151 | 522 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.....sseelaalklfsevsPi 90 lv+lLl+cAeav +d++la+++L+r+ ++p gd++qR+ +f+ +L++rl+ +++ + + ++ + ++ +e++ a++l+++++P+ XP_021639806.1 151 LVHLLLACAEAVGCRDTQLANSILCRIWASVNPWGDSLQRVSYCFAIGLKSRLSL-LHNVNANGTFTNGA-MDvslitGEEKMEAFRLLYQTTPY 243 68***************************************************98.44444333333333.22356779999************* PP GRAS 91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak. 184 + f++++aN+aI +a+ g++ +H iD+++ + lQWp++ ++LasRpegpp++RiTg+++ ++++ ele+ + La+ A++lg+++efn++ ++ XP_021639806.1 244 IAFGFMAANEAISQAARGKDSLHLIDLGMDHTLQWPSFVRTLASRPEGPPKVRITGLVN-NEQNLLELEASMKVLAEDASSLGISLEFNMISEQi 337 ***********************************************************.557999************************86667 PP GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres 279 + + l++e+L++++gEal Vn++++lh++++es + + ++L+++k+l+P++++vveq+a+hn++ Fl rfle+l+yysa+fdslea+lpr+s XP_021639806.1 338 TPSILTPENLNLREGEALFVNSIMNLHKFVKESRGSLK---AILQAIKKLNPTLLTVVEQDANHNGPFFLGRFLESLHYYSAIFDSLEASLPRNS 429 8899**************************88777666...9***************************************************** PP GRAS 280 eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 ++r+k+E+ ++ ei+n+va eg++r+erhe++ +Wr++l++aGF+ v l+ ++qa+++l+ ++ dgy++ +e+g+l+lgWk+rp++ +S+W+ XP_021639806.1 430 QQRMKIENLHFADEIRNIVAYEGSDRVERHERADQWRRQLGRAGFQVVGLK--CMSQARMMLSVYGCDGYTLASEKGCLLLGWKGRPIMLASSWQ 522 ************************************************995..89***************************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 529 aa Download sequence |
MEALNGWLSF PMYESLNHDL AIRRFCPARM EQDQGGEWEE TMMNHEFEFL SPSDGTTSTP 60 HLAASEVEEL VDSFINVDQE DKDDDDHPSP EKFQDDQMET FSTADDVFGD VPMLLEGDDE 120 FEMSTGSSSE DLVAVPSVEV ASHGVDQGLH LVHLLLACAE AVGCRDTQLA NSILCRIWAS 180 VNPWGDSLQR VSYCFAIGLK SRLSLLHNVN ANGTFTNGAM DVSLITGEEK MEAFRLLYQT 240 TPYIAFGFMA ANEAISQAAR GKDSLHLIDL GMDHTLQWPS FVRTLASRPE GPPKVRITGL 300 VNNEQNLLEL EASMKVLAED ASSLGISLEF NMISEQITPS ILTPENLNLR EGEALFVNSI 360 MNLHKFVKES RGSLKAILQA IKKLNPTLLT VVEQDANHNG PFFLGRFLES LHYYSAIFDS 420 LEASLPRNSQ QRMKIENLHF ADEIRNIVAY EGSDRVERHE RADQWRRQLG RAGFQVVGLK 480 CMSQARMMLS VYGCDGYTLA SEKGCLLLGW KGRPIMLASS WQVHNVPSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66350.1 | 2e-83 | GRAS family protein |