PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021639800.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | NF-YC | ||||||||
Protein Properties | Length: 141aa MW: 15944.3 Da PI: 10.2292 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 48 | 2.8e-15 | 4 | 93 | 11 | 98 |
NF-YC 11 ekatdfk.nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivpr 98 e++t++k + ++P r+k+i+k d+d++++ +ea l+s++ elf+ l+ +s a e kr+ +k i av+r + + dfl+d p XP_021639800.1 4 EENTEVKiRPQFPTGRVKRIVKLDKDINKVNSEALLLVSRSTELFLRFLAEKSAEVAIERKRKIVKLDHIRLAVKRHQpTSDFLLDSLPA 93 7788999788****************************************************************9976489*****9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 141 aa Download sequence |
MAEEENTEVK IRPQFPTGRV KRIVKLDKDI NKVNSEALLL VSRSTELFLR FLAEKSAEVA 60 IERKRKIVKL DHIRLAVKRH QPTSDFLLDS LPAPTQSSDK QPAEKTHPSP VPDKPLPPGT 120 RRIDDFFAKS ANEAPVQINE S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43250.1 | 6e-52 | NF-YC family protein |