PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021639683.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

FAR1

Protein Properties

Length: 667aa MW: 77185.5 Da PI: 8.2177

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021639683.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	69.7	7.1e-22	60	143	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++Yn YAkevGF+vr+++s +++++e + + ++Cs +g+++ ++ + r r+etrtgC a++++++ ++++w+v ++ leHnH l XP_021639683.1 60 NYYNCYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVN-----RLRKETRTGCPAMIRMRLVDSKRWRVLEVTLEHNHLL 143 69***************************************9988.....99*******************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 667 aa Download sequence
MAEAPCGIEQ VPDVELIEHQ KEKDGETTDL HGENGMPEER KEFVPPAVGM EFESYDDAYN 60 YYNCYAKEVG FRVRVKNSWF KRNSREKYGA VLCCSSQGFK RIKDVNRLRK ETRTGCPAMI 120 RMRLVDSKRW RVLEVTLEHN HLLGAKIYKS IKKMGTGNKR KSQSSSDAEV RTIKLYRALV 180 IDAGGTGNSS PNAREVRNFS ELPNQLNLKK GDAQAIYNYL CRMQLTNPNF FYLMDLNDEG 240 HLRNVFWIDA RSRAACGYFS DVIYIDNTYL SSKYEIPLVA LVGINHHGQS VLLGCGLLAG 300 ETTESYIWLF KTWLTCLSGC APQTIITDRC KVLQSAIAEA FPRSHHCFGL SHIMRRVPEK 360 LGGLLNYDAI RKALIKAVYE TLKVIEFEAA WVFMVQRFGV VDHEWLRSLY EDRIRWAPVY 420 LKDTFFAGMS AALPGEALNP FFDRYVHKQT PLKEFLDKYE LALQKKHKEE TNADIESRSL 480 GPMLKTRCSF ELQLSKLYTR EIFKKFQFEV EEMYSCFSTT QIHVDGPIII FLVKERVMSE 540 GNRREIRDYE VLYNRSAGEV RCICSCFNFY GYLCRHALCV LNFNGVEEIP SKYILSRWKK 600 DFKRLYIPDH GSSRVDATDR VQWFNQLYRS ALQVVEEGVI SLDHYGVALQ AFEESLNRVH 660 EVEEKQK

Sequence ? help Back to Top

Protein Sequence Length: 667 aa Download sequence

MAEAPCGIEQ VPDVELIEHQ KEKDGETTDL HGENGMPEER KEFVPPAVGM EFESYDDAYN  60
YYNCYAKEVG FRVRVKNSWF KRNSREKYGA VLCCSSQGFK RIKDVNRLRK ETRTGCPAMI  120
RMRLVDSKRW RVLEVTLEHN HLLGAKIYKS IKKMGTGNKR KSQSSSDAEV RTIKLYRALV  180
IDAGGTGNSS PNAREVRNFS ELPNQLNLKK GDAQAIYNYL CRMQLTNPNF FYLMDLNDEG  240
HLRNVFWIDA RSRAACGYFS DVIYIDNTYL SSKYEIPLVA LVGINHHGQS VLLGCGLLAG  300
ETTESYIWLF KTWLTCLSGC APQTIITDRC KVLQSAIAEA FPRSHHCFGL SHIMRRVPEK  360
LGGLLNYDAI RKALIKAVYE TLKVIEFEAA WVFMVQRFGV VDHEWLRSLY EDRIRWAPVY  420
LKDTFFAGMS AALPGEALNP FFDRYVHKQT PLKEFLDKYE LALQKKHKEE TNADIESRSL  480
GPMLKTRCSF ELQLSKLYTR EIFKKFQFEV EEMYSCFSTT QIHVDGPIII FLVKERVMSE  540
GNRREIRDYE VLYNRSAGEV RCICSCFNFY GYLCRHALCV LNFNGVEEIP SKYILSRWKK  600
DFKRLYIPDH GSSRVDATDR VQWFNQLYRS ALQVVEEGVI SLDHYGVALQ AFEESLNRVH  660
EVEEKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	0.0	FAR1 family protein