PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021639661.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MIKC_MADS

Protein Properties

Length: 142aa MW: 16286.9 Da PI: 10.4764

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021639661.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	82.9	2e-26	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n+s rqvtfskRr+g++KKA+EL +LCdaev + ifss+gklye++s XP_021639661.1 10 RIDNSSSRQVTFSKRRKGLIKKAKELAILCDAEVGLAIFSSSGKLYEFAS 59 9***********************************************86 PP
2	K-box	60.2	8.5e-21	78	141	8	69
K-box 8 s..leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 + + +++ + +q+e++ L+++++nLq+++R+llGe+L Ls+k+Lq+Le+qLe sl+ iR kK XP_021639661.1 78 QlmNPTSEVKCWQREATVLRQQLHNLQESHRKLLGEQLYGLSVKDLQSLENQLEMSLQGIRMKK 141 234678899******************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 142 aa Download sequence
MGRGKIVIQR IDNSSSRQVT FSKRRKGLIK KAKELAILCD AEVGLAIFSS SGKLYEFAST 60 SMKSVIERYN KTKEENQQLM NPTSEVKCWQ REATVLRQQL HNLQESHRKL LGEQLYGLSV 120 KDLQSLENQL EMSLQGIRMK KV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37940.1	8e-82	MIKC_MADS family protein