PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021639585.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 456aa MW: 48138.5 Da PI: 7.0401

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021639585.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.3	2e-11	248	293	5	55
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+ + K +Ka++L + ++Y+k Lq XP_021639585.1 248 HSIAERLRRERIAERMKALQELVPNgN------KTDKASMLDEIIDYVKFLQ 293 99*********************55......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MHPCSREMQG INYVLNPSSQ IPLQDLQNQQ HQQIQNSPFD PSSSSNDDFL DQMLSSLPSS 60 SWADLKSPWD LNPPTSLNIP INNSSAKPRE DETPPSIPEN VGFHNFDESV ILAAKLRQHQ 120 ISGGPSPAVA AAAKAMLQQQ LMMATRGGGL PQNDVVDGSS FKCPTRGDGS VQALYNNGFG 180 AGSMHGTGQA SNQSQQHFHH PQAQNFSTPG AGAGMAMNQP QASGSTGGAP AQPRQRVRAR 240 RGQATDPHSI AERLRRERIA ERMKALQELV PNGNKTDKAS MLDEIIDYVK FLQLQVKVLS 300 MSRLGGAAAV APLVADMSSE GRGGAGGGGD CIQATANGGS LPRTNSNSTQ TPSSNDTLTV 360 TEHQVARLME EDMGSAMQYL QGKGLCLMPI SLATAISTTT SHSRNPVLNS NHHPLLHSNG 420 EGPSSPSMSV LTVQSATMGN GRGDASVKDA ASVSKP

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MHPCSREMQG INYVLNPSSQ IPLQDLQNQQ HQQIQNSPFD PSSSSNDDFL DQMLSSLPSS  60
SWADLKSPWD LNPPTSLNIP INNSSAKPRE DETPPSIPEN VGFHNFDESV ILAAKLRQHQ  120
ISGGPSPAVA AAAKAMLQQQ LMMATRGGGL PQNDVVDGSS FKCPTRGDGS VQALYNNGFG  180
AGSMHGTGQA SNQSQQHFHH PQAQNFSTPG AGAGMAMNQP QASGSTGGAP AQPRQRVRAR  240
RGQATDPHSI AERLRRERIA ERMKALQELV PNGNKTDKAS MLDEIIDYVK FLQLQVKVLS  300
MSRLGGAAAV APLVADMSSE GRGGAGGGGD CIQATANGGS LPRTNSNSTQ TPSSNDTLTV  360
TEHQVARLME EDMGSAMQYL QGKGLCLMPI SLATAISTTT SHSRNPVLNS NHHPLLHSNG  420
EGPSSPSMSV LTVQSATMGN GRGDASVKDA ASVSKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	253	258	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	2e-45	bHLH family protein