PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021639510.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 502aa MW: 54909.7 Da PI: 6.4296

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021639510.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.4	6.4e-17	166	215	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_021639510.1 166 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 215 78*****************......55**********************997 PP
2	AP2	41.1	4.4e-13	258	308	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+ k +g XP_021639510.1 258 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEVEAARAYDKAAIKCNG 308 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MLDLNLNAES FESIQNSDSV ALMEKYQYQY PEGSGTSNSS IVNADVSSNE DSCSTRACTC 60 DASNSSNNNT SSMFAFNFDM LKVGGGGGGG NENENVAVVT KEFFPVSNGK GVGGGYGNSF 120 GQGSSSNWID LSFERQQDIG DGEVRVVQPP SQQVKKSRRG PRSRSSQYRG VTFYRRTGRW 180 ESHIWDCGKQ VYLGGFDTAH AAARAYDRAA IKFRGVDADI NFNLTDYEDD LKQMKNLTKE 240 EFVHILRRQS TGFSRGSSKY RGVTLHKCGR WEARMGQFLG KKYIYLGLFD SEVEAARAYD 300 KAAIKCNGRE AVTNFEPSTY KGEMISEATN EGTDHNLDLN LGISPSLGDG PRENEGRLQF 360 HLGPYDMDSK SSGENSSALM VGDLPFKGPV ASDHPMFWNS GYPSFFPNEE RAPDKRIALG 420 SSQGLPNWVW QMHGQVTATP MTMFSTAASS GFSFSATPPS AAILPSKPLN QSAQNLCFSP 480 PATMTTGTSH FYYPVKPPQA PP

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MLDLNLNAES FESIQNSDSV ALMEKYQYQY PEGSGTSNSS IVNADVSSNE DSCSTRACTC  60
DASNSSNNNT SSMFAFNFDM LKVGGGGGGG NENENVAVVT KEFFPVSNGK GVGGGYGNSF  120
GQGSSSNWID LSFERQQDIG DGEVRVVQPP SQQVKKSRRG PRSRSSQYRG VTFYRRTGRW  180
ESHIWDCGKQ VYLGGFDTAH AAARAYDRAA IKFRGVDADI NFNLTDYEDD LKQMKNLTKE  240
EFVHILRRQS TGFSRGSSKY RGVTLHKCGR WEARMGQFLG KKYIYLGLFD SEVEAARAYD  300
KAAIKCNGRE AVTNFEPSTY KGEMISEATN EGTDHNLDLN LGISPSLGDG PRENEGRLQF  360
HLGPYDMDSK SSGENSSALM VGDLPFKGPV ASDHPMFWNS GYPSFFPNEE RAPDKRIALG  420
SSQGLPNWVW QMHGQVTATP MTMFSTAASS GFSFSATPPS AAILPSKPLN QSAQNLCFSP  480
PATMTTGTSH FYYPVKPPQA PP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	1e-135	AP2 family protein