PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021639291.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

ARF

Protein Properties

Length: 586aa MW: 64670.2 Da PI: 6.4271

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021639291.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	78.6	6.7e-25	124	225	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f kvltpsd+++ g +++p+ +a+++ ++ + tlt++d +g sW++++iyr++++r++lt+GW++Fv+ ++L +gD+vvF+ ++ XP_021639291.1 124 FAKVLTPSDANNGGGFSVPRFCADSIfpplnyqADPPVQ--TLTVTDIHGFSWNFRHIYRGSPRRHLLTTGWSKFVNHKKLIAGDSVVFM--RNL 214 89*******************999995444444..9*********************************************..568 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++++++v+r+ XP_021639291.1 215 AGNMFIGVRRA 225 9999999986 PP
2	Auxin_resp	83.5	4.5e-28	273	357	1	83
Auxin_resp 1 aahaastksvFevvYnPrast.seFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 a+++a+++ +FevvY+Pra++ s+Fvv++e ve+al+v +++GmR++m++etedss+ + +Gtv++ d W++S+Wr+L+ XP_021639291.1 273 AVERAAQGLPFEVVYYPRAGWfSDFVVRAEVVERALSVFWTAGMRVQMEMETEDSSRMTRfQGTVSSAAVRDCGPWRGSPWRMLQ 357 678999***********987*****************************996544********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 586 aa Download sequence
MPPLPPSTDL RRVNQRIWRA CAGSSVHIPT FNSRVYYFPQ GHLEQSSPSA SPALLSTLAL 60 SRPLILCQIS AVQFLADPVT DEVYAKLLLF PIDPSLNHSL PLLEPCGCLE REGRDDDEDK 120 IVAFAKVLTP SDANNGGGFS VPRFCADSIF PPLNYQADPP VQTLTVTDIH GFSWNFRHIY 180 RGSPRRHLLT TGWSKFVNHK KLIAGDSVVF MRNLAGNMFI GVRRAVRSNN DEDCSRWREQ 240 IGCVTGDVKM KVKEEGFSRS VRGRVSQEAV LAAVERAAQG LPFEVVYYPR AGWFSDFVVR 300 AEVVERALSV FWTAGMRVQM EMETEDSSRM TRFQGTVSSA AVRDCGPWRG SPWRMLQIAW 360 DEPEVLQNAK KVSPWQVEFV APTPPLQAAF PPVKRFKIPE NSGLLTDGDG KLFFPMSGQS 420 NSTVGNMNES LLNYNTFPAG MQGARQNPFP TFGLSNFLRE NASQICPDNV FGSKMVQKLK 480 TVSTELTIGS SQSDNLSLDS QSSMHSFGSE LVANPGSSST KAGISSVQLF GRIIHVNQPV 540 GSGFDDDGCM EDCGSKEYNE NNPLDLALAS ASSYTELLNR IDVQCQ

Sequence ? help Back to Top

Protein Sequence Length: 586 aa Download sequence

MPPLPPSTDL RRVNQRIWRA CAGSSVHIPT FNSRVYYFPQ GHLEQSSPSA SPALLSTLAL  60
SRPLILCQIS AVQFLADPVT DEVYAKLLLF PIDPSLNHSL PLLEPCGCLE REGRDDDEDK  120
IVAFAKVLTP SDANNGGGFS VPRFCADSIF PPLNYQADPP VQTLTVTDIH GFSWNFRHIY  180
RGSPRRHLLT TGWSKFVNHK KLIAGDSVVF MRNLAGNMFI GVRRAVRSNN DEDCSRWREQ  240
IGCVTGDVKM KVKEEGFSRS VRGRVSQEAV LAAVERAAQG LPFEVVYYPR AGWFSDFVVR  300
AEVVERALSV FWTAGMRVQM EMETEDSSRM TRFQGTVSSA AVRDCGPWRG SPWRMLQIAW  360
DEPEVLQNAK KVSPWQVEFV APTPPLQAAF PPVKRFKIPE NSGLLTDGDG KLFFPMSGQS  420
NSTVGNMNES LLNYNTFPAG MQGARQNPFP TFGLSNFLRE NASQICPDNV FGSKMVQKLK  480
TVSTELTIGS SQSDNLSLDS QSSMHSFGSE LVANPGSSST KAGISSVQLF GRIIHVNQPV  540
GSGFDDDGCM EDCGSKEYNE NNPLDLALAS ASSYTELLNR IDVQCQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77850.1	1e-176	ARF family protein