PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021638424.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WRKY

Protein Properties

Length: 313aa MW: 35911.2 Da PI: 5.6888

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021638424.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	84.3	1.2e-26	127	187	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqKe+ ++++prsY+rCt++ gC+++k+v+r +edp++ +tY g+H+++ XP_021638424.1 127 EDGYAWRKYGQKEILNAKYPRSYFRCTHKydqGCKATKQVQRMEEDPQMYRTTYIGHHTCR 187 8*************************99999***********************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence
MATPWPENLS TNRVRVIKVL AQGQESATHL QLLLKKPYGE DVFLLDDKLV VKIMRSFTEA 60 LSLLTSSDFV EILQNQTTSQ VDSVCCDDRR SRDSGESKKR PTAKDRRGCY KRKKTSQSFI 120 RASSTIEDGY AWRKYGQKEI LNAKYPRSYF RCTHKYDQGC KATKQVQRME EDPQMYRTTY 180 IGHHTCRDIL KAPQIIATPD SVSDPWESYM LTSDSNIPTQ LDHQRTTIKQ EHKEETPLSD 240 LTDNLSSLDP IMWKDLVSFE SSAEPAADHY RAVASTTMCT EATSQSDDMD LVVKSIDFDS 300 DFQFDESEFN YLS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	98	114	KKRPTAKDRRGCYKRKK
2	111	138	KRKKTSQSFIRASSTIEDGYAWRKYGQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56400.1	4e-48	WRKY family protein