PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021638313.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 454aa MW: 51459.6 Da PI: 6.4566

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021638313.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	70.7	2.7e-22	123	219	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 +Wt++ v++Li+++ +++++ + +kk++W++vsk m ++g+++sp+qC++k+++lnkryk+++++ +++ +++++++ ++ d XP_021638313.1 123 KWTDNVVRLLIAVVAYVGDDGAFEGveglkrksgilQKKGKWKSVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNDILGRGtSCRVVEKPALMD 217 7*************99999976445667778888********************************************5689998888888 PP trihelix 84 ql 85 ++ XP_021638313.1 218 SM 219 77 PP

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence
MDTSGLGGRF LSHPTGGLLN LESPIHRQQQ TQLGLPSLAH QNHMNLVGGH ENDHQTIGLM 60 EVKGSIPKGY SVVFSKGKAV SPFNATNNGS VSEDDEPSFT EDGNGENTSG AKGKKGSPWQ 120 RMKWTDNVVR LLIAVVAYVG DDGAFEGVEG LKRKSGILQK KGKWKSVSKI MISKGCHVSP 180 QQCEDKFNDL NKRYKRLNDI LGRGTSCRVV EKPALMDSMP HLSAKSKDDV RKILSSKHLF 240 YREMCAYHNG QRIPDCQDID LQGCSLPLER CSRDNNGSEE EEAGGHDDSD DDESDNESDL 300 NAYEDGERMG KYEKNKVNEE DDHLWAQSGL CNGFEVEMSG ILQDPMVSLW EKKEWIKKQK 360 LQLLEQRVSI QAQAGELEKR RFKWLRYCSK KDREFDRLRL ENERMRLENE QSILQLRQKQ 420 LEMDFRSSET SRDLTSLGID RTQGRGQIDL DRHQ

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence

MDTSGLGGRF LSHPTGGLLN LESPIHRQQQ TQLGLPSLAH QNHMNLVGGH ENDHQTIGLM  60
EVKGSIPKGY SVVFSKGKAV SPFNATNNGS VSEDDEPSFT EDGNGENTSG AKGKKGSPWQ  120
RMKWTDNVVR LLIAVVAYVG DDGAFEGVEG LKRKSGILQK KGKWKSVSKI MISKGCHVSP  180
QQCEDKFNDL NKRYKRLNDI LGRGTSCRVV EKPALMDSMP HLSAKSKDDV RKILSSKHLF  240
YREMCAYHNG QRIPDCQDID LQGCSLPLER CSRDNNGSEE EEAGGHDDSD DDESDNESDL  300
NAYEDGERMG KYEKNKVNEE DDHLWAQSGL CNGFEVEMSG ILQDPMVSLW EKKEWIKKQK  360
LQLLEQRVSI QAQAGELEKR RFKWLRYCSK KDREFDRLRL ENERMRLENE QSILQLRQKQ  420
LEMDFRSSET SRDLTSLGID RTQGRGQIDL DRHQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	2e-81	Trihelix family protein