PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021638156.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WRKY

Protein Properties

Length: 585aa MW: 63863.8 Da PI: 7.0047

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021638156.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.6	2.6e-33	260	317	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh+k XP_021638156.1 260 DDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSL-DGQITEIVYKGSHNHPK 317 8**************************************.*************85 PP
2	WRKY	105.4	3.1e-33	420	478	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Cts gCpv+k+ver+++d ++v++tYeg+Hnh+ XP_021638156.1 420 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSVGCPVRKHVERASHDARAVITTYEGKHNHD 478 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 585 aa Download sequence
MASSSSSSSS SLNTYINSQP TFSFSTHLLM TSSSSSSSSS SSSFTNLLST DTKDMDSISW 60 GLYDHGTDTI GIEIPKFKSF TPPSLPLSPP PVSPSSYLAI PTGLSLTELL DSPVLFSGSN 120 VLPSPTTGAF AGQTFNWRNN SNDNQRGGRG EEKSFSDFSF QTQTNPTSSS IFQSSSSLVS 180 VEQSIKRQQE AWNFNKPTKQ TDFSSEKGGV VKSEFRPMQS FSSEMAPLQS SLQNNAASQP 240 SYSQYNNQPA PYMREQRRSD DGYNWRKYGQ KQVKGSENPR SYYKCTYPNC PTKKKVERSL 300 DGQITEIVYK GSHNHPKPQS TRSSSQSMQP SAGVSSEISD QSVAPLESVT MQEDSSISIG 360 DDEFDQSSPI SNSGGDEDEN EPEAKRFKGQ NENEGILAAG SRTVREPRIV VQTTSDIDIL 420 DDGYRWRKYG QKVVKGNPNP RSYYKCTSVG CPVRKHVERA SHDARAVITT YEGKHNHDVP 480 AARGSGYPSN RPPSNGNSSS MPIPIRPSVT TSTNYPSSLN STRLPTSASQ APFNLEMLHG 540 PGSIGFSGYG KPTGSYMNQT QYTQSAYSGP KEEPKDDSLL DSFLC

Sequence ? help Back to Top

Protein Sequence Length: 585 aa Download sequence

MASSSSSSSS SLNTYINSQP TFSFSTHLLM TSSSSSSSSS SSSFTNLLST DTKDMDSISW  60
GLYDHGTDTI GIEIPKFKSF TPPSLPLSPP PVSPSSYLAI PTGLSLTELL DSPVLFSGSN  120
VLPSPTTGAF AGQTFNWRNN SNDNQRGGRG EEKSFSDFSF QTQTNPTSSS IFQSSSSLVS  180
VEQSIKRQQE AWNFNKPTKQ TDFSSEKGGV VKSEFRPMQS FSSEMAPLQS SLQNNAASQP  240
SYSQYNNQPA PYMREQRRSD DGYNWRKYGQ KQVKGSENPR SYYKCTYPNC PTKKKVERSL  300
DGQITEIVYK GSHNHPKPQS TRSSSQSMQP SAGVSSEISD QSVAPLESVT MQEDSSISIG  360
DDEFDQSSPI SNSGGDEDEN EPEAKRFKGQ NENEGILAAG SRTVREPRIV VQTTSDIDIL  420
DDGYRWRKYG QKVVKGNPNP RSYYKCTSVG CPVRKHVERA SHDARAVITT YEGKHNHDVP  480
AARGSGYPSN RPPSNGNSSS MPIPIRPSVT TSTNYPSSLN STRLPTSASQ APFNLEMLHG  540
PGSIGFSGYG KPTGSYMNQT QYTQSAYSGP KEEPKDDSLL DSFLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-112	WRKY family protein