PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021638009.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WRKY

Protein Properties

Length: 440aa MW: 48393.3 Da PI: 7.2851

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021638009.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.6	4.7e-32	90	147	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers+ d++++ei+Y+g+H+h+k XP_021638009.1 90 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITEIIYKGTHDHPK 147 8**************************************.*************85 PP
2	WRKY	106.8	1.1e-33	255	313	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+ XP_021638009.1 255 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 313 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MNHQRSEQSV QVQGQCQSQS HASSPTVKSE MAVPLNELSL SAPLPMVTLG SSAPTQVDSD 60 DLNQMGISNS GLQTSQPDHK GGSSLSMPSD DGYNWRKYGQ KHVKGSEFPR SYYKCTHPNC 120 EVKKLFERSH DGQITEIIYK GTHDHPKPQP SRRYTAGAVL SMQEDRSDKI LSLHGRDDKS 180 SGANGHVSNT IEPNGTPEQS PLTPNDDCTE GAEDDDDPFS KRRKMDTGGF DVTPVIKPIR 240 EPRVVVQTMS EVDILDDGYR WRKYGQKVVR GNPNPRSYYK CTNAGCPVRK HVERASHDPK 300 AVITTYEGKH NHDVPTARSS SHDTAGPAPV NGPSRIRSDE SETISLDLGV GIRSAAENRS 360 NDQQQAMHSE LTQNQTQTSG SSFRIVPRAP ATPYYGVLNV GMNQYGSRQT PNEGRSIEIS 420 PLSHSSYPYP QNVGRLLMGP

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MNHQRSEQSV QVQGQCQSQS HASSPTVKSE MAVPLNELSL SAPLPMVTLG SSAPTQVDSD  60
DLNQMGISNS GLQTSQPDHK GGSSLSMPSD DGYNWRKYGQ KHVKGSEFPR SYYKCTHPNC  120
EVKKLFERSH DGQITEIIYK GTHDHPKPQP SRRYTAGAVL SMQEDRSDKI LSLHGRDDKS  180
SGANGHVSNT IEPNGTPEQS PLTPNDDCTE GAEDDDDPFS KRRKMDTGGF DVTPVIKPIR  240
EPRVVVQTMS EVDILDDGYR WRKYGQKVVR GNPNPRSYYK CTNAGCPVRK HVERASHDPK  300
AVITTYEGKH NHDVPTARSS SHDTAGPAPV NGPSRIRSDE SETISLDLGV GIRSAAENRS  360
NDQQQAMHSE LTQNQTQTSG SSFRIVPRAP ATPYYGVLNV GMNQYGSRQT PNEGRSIEIS  420
PLSHSSYPYP QNVGRLLMGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.1	1e-157	WRKY family protein