PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021638004.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WRKY

Protein Properties

Length: 569aa MW: 62145.6 Da PI: 7.2316

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021638004.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.1	6.7e-32	219	276	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers+ d++++ei+Y+g+H+h+k XP_021638004.1 219 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITEIIYKGTHDHPK 276 8**************************************.*************85 PP
2	WRKY	106.3	1.6e-33	384	442	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+ XP_021638004.1 384 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 442 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
MDSTSHDSEL RLRGASDDVS DSGDRTRHES GGARYKLMSP AKLPISRSPC ITIPPGLSPT 60 SFLESPVLLS NVKAEPSPTT GSFTNPQTGH GFLISNSFSM TVPSNAHGER KSSCFEFRPH 120 AISNLVPADM NHQRSEQSVQ VQGQCQSQSH ASSPTVKSEM AVPLNELSLS APLPMVTLGS 180 SAPTQVDSDD LNQMGISNSG LQTSQPDHKG GSSLSMPSDD GYNWRKYGQK HVKGSEFPRS 240 YYKCTHPNCE VKKLFERSHD GQITEIIYKG THDHPKPQPS RRYTAGAVLS MQEDRSDKIL 300 SLHGRDDKSS GANGHVSNTI EPNGTPEQSP LTPNDDCTEG AEDDDDPFSK RRKMDTGGFD 360 VTPVIKPIRE PRVVVQTMSE VDILDDGYRW RKYGQKVVRG NPNPRSYYKC TNAGCPVRKH 420 VERASHDPKA VITTYEGKHN HDVPTARSSS HDTAGPAPVN GPSRIRSDES ETISLDLGVG 480 IRSAAENRSN DQQQAMHSEL TQNQTQTSGS SFRIVPRAPA TPYYGVLNVG MNQYGSRQTP 540 NEGRSIEISP LSHSSYPYPQ NVGRLLMGP

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

MDSTSHDSEL RLRGASDDVS DSGDRTRHES GGARYKLMSP AKLPISRSPC ITIPPGLSPT  60
SFLESPVLLS NVKAEPSPTT GSFTNPQTGH GFLISNSFSM TVPSNAHGER KSSCFEFRPH  120
AISNLVPADM NHQRSEQSVQ VQGQCQSQSH ASSPTVKSEM AVPLNELSLS APLPMVTLGS  180
SAPTQVDSDD LNQMGISNSG LQTSQPDHKG GSSLSMPSDD GYNWRKYGQK HVKGSEFPRS  240
YYKCTHPNCE VKKLFERSHD GQITEIIYKG THDHPKPQPS RRYTAGAVLS MQEDRSDKIL  300
SLHGRDDKSS GANGHVSNTI EPNGTPEQSP LTPNDDCTEG AEDDDDPFSK RRKMDTGGFD  360
VTPVIKPIRE PRVVVQTMSE VDILDDGYRW RKYGQKVVRG NPNPRSYYKC TNAGCPVRKH  420
VERASHDPKA VITTYEGKHN HDVPTARSSS HDTAGPAPVN GPSRIRSDES ETISLDLGVG  480
IRSAAENRSN DQQQAMHSEL TQNQTQTSGS SFRIVPRAPA TPYYGVLNVG MNQYGSRQTP  540
NEGRSIEISP LSHSSYPYPQ NVGRLLMGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	0.0	WRKY family protein