PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021637852.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

ERF

Protein Properties

Length: 412aa MW: 46104.3 Da PI: 4.9297

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021637852.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	57.9	2.5e-18	80	129	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++k +g+WvAeIr+p + r r +lg+f ta eAa a+++a+++++g XP_021637852.1 80 IYRGVRQRK-WGKWVAEIRVP---N-RgPRLWLGTFPTASEAALAYDNAARAMYG 129 69****9.******8...2.35**********************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MVTFDQGSNV ISKPLASTRK RKRREGNSSV AETLQKWKEY NKYLDSCTNG DDKPVRKIPA 60 KGSRKGCMKG KGGPENSQCI YRGVRQRKWG KWVAEIRVPN RGPRLWLGTF PTASEAALAY 120 DNAARAMYGT LARLNFPELS NSTSSSKDFC LAATSSGYSS VATPAGSDST TTSNHSEVCA 180 DEDTKEHIVK IGDGEGESKI KLQPPEVIKS VSSCIKLKKE AKEELESVSP WSKLKQEAKE 240 EREDVTESER SRMPEIKIPE KDEIQQNNIC EQKQKGVCDI QQDPKDESLS VKDYGWGNGC 300 DGMDYLQNFK IDEMFSVDEL LGAIDNNPLN LDFDSDQLLF TDNDHLLHEL PLDLSFQLQS 360 PDARFIGDHQ HIQQVPSGGD YNFDFLNPGR QEDNNVPLDD QGYFSLGLPD RF

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MVTFDQGSNV ISKPLASTRK RKRREGNSSV AETLQKWKEY NKYLDSCTNG DDKPVRKIPA  60
KGSRKGCMKG KGGPENSQCI YRGVRQRKWG KWVAEIRVPN RGPRLWLGTF PTASEAALAY  120
DNAARAMYGT LARLNFPELS NSTSSSKDFC LAATSSGYSS VATPAGSDST TTSNHSEVCA  180
DEDTKEHIVK IGDGEGESKI KLQPPEVIKS VSSCIKLKKE AKEELESVSP WSKLKQEAKE  240
EREDVTESER SRMPEIKIPE KDEIQQNNIC EQKQKGVCDI QQDPKDESLS VKDYGWGNGC  300
DGMDYLQNFK IDEMFSVDEL LGAIDNNPLN LDFDSDQLLF TDNDHLLHEL PLDLSFQLQS  360
PDARFIGDHQ HIQQVPSGGD YNFDFLNPGR QEDNNVPLDD QGYFSLGLPD RF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	19	24	RKRKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40340.1	1e-62	ERF family protein