PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021637714.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 364aa MW: 40184 Da PI: 10.1236

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021637714.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	47.3	5.6e-15	67	154	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +Li+a e+ +l+rg+lk+++W+ev++ + ++ ++ +qCk++++ ++k+yk +k+ ++ + s++p++++l+ XP_021637714.1 67 CWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVADIVssreDYKKAAKTDIQCKNRIDTVKKKYKLEKAKIASG--GGPSKWPFYERLD 154 7***********************************84333344455778*****************97..67778****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MDDDEEIQSH TSAATGSPSP SPPNGRITVT VAAAPPSSHP QQQNNNSLAL TLPIQQPKTN 60 GGGREDCWSE GATAVLIDAW GERYLELSRG NLKQKHWKEV ADIVSSREDY KKAAKTDIQC 120 KNRIDTVKKK YKLEKAKIAS GGGPSKWPFY ERLDQLIGPA AKIPVTAAAA AASLSSKVPV 180 GIPVGIRSGG ASGSNQYQFH QGKAQMKSNQ VTKSHNVKPH LRKRNQVETE SSSEEEENFP 240 DSDDSLPPEK KSRVVVQRGV NTKGAKERKG WGNSIRMLTQ AILKFGEAYE QAESVKLQQV 300 VEMEKTRMKF AKELELQRMQ FFMKTQMEIS QLKRGRRGAN GSNHHHHISG NNIIHNNNNS 360 DSDN

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MDDDEEIQSH TSAATGSPSP SPPNGRITVT VAAAPPSSHP QQQNNNSLAL TLPIQQPKTN  60
GGGREDCWSE GATAVLIDAW GERYLELSRG NLKQKHWKEV ADIVSSREDY KKAAKTDIQC  120
KNRIDTVKKK YKLEKAKIAS GGGPSKWPFY ERLDQLIGPA AKIPVTAAAA AASLSSKVPV  180
GIPVGIRSGG ASGSNQYQFH QGKAQMKSNQ VTKSHNVKPH LRKRNQVETE SSSEEEENFP  240
DSDDSLPPEK KSRVVVQRGV NTKGAKERKG WGNSIRMLTQ AILKFGEAYE QAESVKLQQV  300
VEMEKTRMKF AKELELQRMQ FFMKTQMEIS QLKRGRRGAN GSNHHHHISG NNIIHNNNNS  360
DSDN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G14180.1	6e-79	Trihelix family protein