PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021637466.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

ARF

Protein Properties

Length: 728aa MW: 80127.9 Da PI: 7.3783

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021637466.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	75.3	7e-24	157	253	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k+lt sd++++g +++p++ ae++ + s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F + ++el+ XP_021637466.1 157 FCKTLTASDTSTHGGFSVPRRAAEDCfpPLR--PSQELVAKDLHGFEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL--RGADGELR 247 99**********************76555..4569*********************************************..3489999 PP EEEE-S CS B3 94 vkvfrk 99 ++++r+ XP_021637466.1 248 LGIRRA 253 ***996 PP
2	Auxin_resp	122.5	3e-40	278	359	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 +++a+s++svF+++YnPras seF+++++k++k+l++++s+GmRfkm+feted++err+ G+++g+sdldp rWp+SkWr+L XP_021637466.1 278 VVNAISMRSVFNIYYNPRASLSEFIIPFHKFLKSLDHSFSIGMRFKMRFETEDAAERRYVGMITGISDLDPARWPGSKWRCL 359 6899*****************************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 728 aa Download sequence
MVGIIDLNTT EEDETTPSSV SLSSPSSSSA SALSASNLSP PGSSASSTVC LELWHACAGP 60 LISLPKRGSV VVYFPQGHLE QLPDLPLAAC DLPSHIFCRV VDVKLHAEAA NDDVYAQVSL 120 VPENEQIGQE LKERKIEGDG EEEDMKAAVK STTPHMFCKT LTASDTSTHG GFSVPRRAAE 180 DCFPPLRPSQ ELVAKDLHGF EWRFRHIYRG QPRRHLLTTG WSAFVNKKKL VSGDAVLFLR 240 GADGELRLGI RRAAQVKCGA TLPAQCSQQL NHSTLTDVVN AISMRSVFNI YYNPRASLSE 300 FIIPFHKFLK SLDHSFSIGM RFKMRFETED AAERRYVGMI TGISDLDPAR WPGSKWRCLR 360 VRWDDMETSR HSRVSPWEIE PSGPVSSCST FMAPGLKRSR SGLPSSKHEF PVPDGIGVSD 420 FGESSRFQKV LQGQEILSFN TPYDGVDQNR HLSETRRCVP SSLGSGIATR RNGAEGPVAS 480 SDGNHKGIGC SESFRLHKVL QGQEIIPRSP FRRSPTSNDV SENGCFGISD GVQMTSSRNG 540 WSAMMQGYNT HMRPPTQVSS PSSVLMFQQA CNPISNPSPA YNLSDHEEQG IGIQSWFRNS 600 ETCDGKRMSS HSEHICRRDD QWGISSFGVS RDHIQHGIAQ STFRGGHDIV TSCKSSCRLF 660 GFQLTEDRHV ANKDDDVSIP ATSLKPGSSF LPHVGEQFHL KPPAITNAVG SNCTKGILQQ 720 HPENYHIY

Sequence ? help Back to Top

Protein Sequence Length: 728 aa Download sequence

MVGIIDLNTT EEDETTPSSV SLSSPSSSSA SALSASNLSP PGSSASSTVC LELWHACAGP  60
LISLPKRGSV VVYFPQGHLE QLPDLPLAAC DLPSHIFCRV VDVKLHAEAA NDDVYAQVSL  120
VPENEQIGQE LKERKIEGDG EEEDMKAAVK STTPHMFCKT LTASDTSTHG GFSVPRRAAE  180
DCFPPLRPSQ ELVAKDLHGF EWRFRHIYRG QPRRHLLTTG WSAFVNKKKL VSGDAVLFLR  240
GADGELRLGI RRAAQVKCGA TLPAQCSQQL NHSTLTDVVN AISMRSVFNI YYNPRASLSE  300
FIIPFHKFLK SLDHSFSIGM RFKMRFETED AAERRYVGMI TGISDLDPAR WPGSKWRCLR  360
VRWDDMETSR HSRVSPWEIE PSGPVSSCST FMAPGLKRSR SGLPSSKHEF PVPDGIGVSD  420
FGESSRFQKV LQGQEILSFN TPYDGVDQNR HLSETRRCVP SSLGSGIATR RNGAEGPVAS  480
SDGNHKGIGC SESFRLHKVL QGQEIIPRSP FRRSPTSNDV SENGCFGISD GVQMTSSRNG  540
WSAMMQGYNT HMRPPTQVSS PSSVLMFQQA CNPISNPSPA YNLSDHEEQG IGIQSWFRNS  600
ETCDGKRMSS HSEHICRRDD QWGISSFGVS RDHIQHGIAQ STFRGGHDIV TSCKSSCRLF  660
GFQLTEDRHV ANKDDDVSIP ATSLKPGSSF LPHVGEQFHL KPPAITNAVG SNCTKGILQQ  720
HPENYHIY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33860.1	0.0	ARF family protein