PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021637465.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family ARF
Protein Properties Length: 729aa    MW: 80323 Da    PI: 7.2817
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021637465.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.65.5e-24153254199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++p++ ae++      + +++ s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F   +  +
  XP_021637465.1 153 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyS-QQRPSQELVAKDLHGFEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL--RGAD 244
                     99****************************963.3445679************************************************..3489 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                     +el+++++r+
  XP_021637465.1 245 GELRLGIRRA 254
                     999****996 PP
2Auxin_resp122.53e-40279360182
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                     +++a+s++svF+++YnPras seF+++++k++k+l++++s+GmRfkm+feted++err+ G+++g+sdldp rWp+SkWr+L
  XP_021637465.1 279 VVNAISMRSVFNIYYNPRASLSEFIIPFHKFLKSLDHSFSIGMRFKMRFETEDAAERRYVGMITGISDLDPARWPGSKWRCL 360
                     6899*****************************************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 729 aa     Download sequence    
MVGIIDLNTT EEDETTPSSV SLSSPSSSSA SALSASNLSP PGSSASSTVC LELWHACAGP  60
LISLPKRGSV VVYFPQGHLE QLPDLPLAAC DLPSHIFCRV VDVKLHAEAA NDDVYAQVSL  120
VPENEELKER KIEGDGEEED MKAAVKSTTP HMFCKTLTAS DTSTHGGFSV PRRAAEDCFP  180
PLDYSQQRPS QELVAKDLHG FEWRFRHIYR GQPRRHLLTT GWSAFVNKKK LVSGDAVLFL  240
RGADGELRLG IRRAAQVKCG ATLPAQCSQQ LNHSTLTDVV NAISMRSVFN IYYNPRASLS  300
EFIIPFHKFL KSLDHSFSIG MRFKMRFETE DAAERRYVGM ITGISDLDPA RWPGSKWRCL  360
RVRWDDMETS RHSRVSPWEI EPSGPVSSCS TFMAPGLKRS RSGLPSSKHE FPVPDGIGVS  420
DFGESSRFQK VLQGQEILSF NTPYDGVDQN RHLSETRRCV PSSLGSGIAT RRNGAEGPVA  480
SSDGNHKGIG CSESFRLHKV LQGQEIIPRS PFRRSPTSND VSENGCFGIS DGVQMTSSRN  540
GWSAMMQGYN THMRPPTQVS SPSSVLMFQQ ACNPISNPSP AYNLSDHEEQ GIGIQSWFRN  600
SETCDGKRMS SHSEHICRRD DQWGISSFGV SRDHIQHGIA QSTFRGGHDI VTSCKSSCRL  660
FGFQLTEDRH VANKDDDVSI PATSLKPGSS FLPHVGEQFH LKPPAITNAV GSNCTKGILQ  720
QHPENYHIY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33860.10.0ARF family protein