PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021637464.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family ARF
Protein Properties Length: 733aa    MW: 80749.5 Da    PI: 7.2817
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021637464.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.65.6e-24157258199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++p++ ae++      + +++ s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F   +  +
  XP_021637464.1 157 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyS-QQRPSQELVAKDLHGFEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL--RGAD 248
                     99****************************963.3445679************************************************..3489 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                     +el+++++r+
  XP_021637464.1 249 GELRLGIRRA 258
                     999****996 PP
2Auxin_resp122.53.1e-40283364182
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                     +++a+s++svF+++YnPras seF+++++k++k+l++++s+GmRfkm+feted++err+ G+++g+sdldp rWp+SkWr+L
  XP_021637464.1 283 VVNAISMRSVFNIYYNPRASLSEFIIPFHKFLKSLDHSFSIGMRFKMRFETEDAAERRYVGMITGISDLDPARWPGSKWRCL 364
                     6899*****************************************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 733 aa     Download sequence    
MVGIIDLNTT EEDETTPSSV SLSSPSSSSA SALSASNLSP PGSSASSTVC LELWHACAGP  60
LISLPKRGSV VVYFPQGHLE QLPDLPLAAC DLPSHIFCRV VDVKLHAEAA NDDVYAQVSL  120
VPENEQIGQE LKERKIEGDG EEEDMKAAVK STTPHMFCKT LTASDTSTHG GFSVPRRAAE  180
DCFPPLDYSQ QRPSQELVAK DLHGFEWRFR HIYRGQPRRH LLTTGWSAFV NKKKLVSGDA  240
VLFLRGADGE LRLGIRRAAQ VKCGATLPAQ CSQQLNHSTL TDVVNAISMR SVFNIYYNPR  300
ASLSEFIIPF HKFLKSLDHS FSIGMRFKMR FETEDAAERR YVGMITGISD LDPARWPGSK  360
WRCLRVRWDD METSRHSRVS PWEIEPSGPV SSCSTFMAPG LKRSRSGLPS SKHEFPVPDG  420
IGVSDFGESS RFQKVLQGQE ILSFNTPYDG VDQNRHLSET RRCVPSSLGS GIATRRNGAE  480
GPVASSDGNH KGIGCSESFR LHKVLQGQEI IPRSPFRRSP TSNDVSENGC FGISDGVQMT  540
SSRNGWSAMM QGYNTHMRPP TQVSSPSSVL MFQQACNPIS NPSPAYNLSD HEEQGIGIQS  600
WFRNSETCDG KRMSSHSEHI CRRDDQWGIS SFGVSRDHIQ HGIAQSTFRG GHDIVTSCKS  660
SCRLFGFQLT EDRHVANKDD DVSIPATSLK PGSSFLPHVG EQFHLKPPAI TNAVGSNCTK  720
GILQQHPENY HIY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33860.10.0ARF family protein