PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021637105.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | C3H | ||||||||
Protein Properties | Length: 418aa MW: 45483.3 Da PI: 7.2162 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 26.9 | 8.2e-09 | 105 | 126 | 4 | 26 |
---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHg 26 + C+++ + G C++Gd+C+F H+ XP_021637105.1 105 KVCNYWVQ-GKCSFGDKCRFLHS 126 68******.*************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 418 aa Download sequence |
MDLDAQGGNS RVFHRLGAQP ANDTRQQKVC HHWRAGRCSR YPCPYLHREL PPPPPAGSNG 60 NASKRGFSND SGFSGSSGTR RSGNFSNASS WGRVGNNTIL RKTEKVCNYW VQGKCSFGDK 120 CRFLHSWSLG ESFSLLTQLD GHQKVVTGIA LPSGSDKLYT GSNDETCMGV IQLGGEVGCM 180 INEDPWIFVG VPNVVKAWNT QNNIDLSLTG PAGQVYALVV GNDLLFAGTQ DGAILAWKFN 240 AVTFNFEPAA SLTGHTVAVV SLVVGANRLY SGSMDHSIRV WNLETLQCVQ TLTEHSSVVM 300 SVLCWDRFLL SCSLDQTIKV WAATESGNLE VTYTHKEEHG LLTLCGMLDF EGKPVLLCSC 360 NDNSVRLFDL PSFSERGKIY AKQEIRAIQT GPGGLFFTGD GTGQVRVWKC VDEPATTA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25440.1 | 0.0 | C3H family protein |