PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021637104.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family C3H
Protein Properties Length: 428aa    MW: 46651.6 Da    PI: 7.2362
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021637104.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH26.98.4e-09105126426
                     ---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                     + C+++ + G C++Gd+C+F H+
  XP_021637104.1 105 KVCNYWVQ-GKCSFGDKCRFLHS 126
                     68******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    
MDLDAQGGNS RVFHRLGAQP ANDTRQQKVC HHWRAGRCSR YPCPYLHREL PPPPPAGSNG  60
NASKRGFSND SGFSGSSGTR RSGNFSNASS WGRVGNNTIL RKTEKVCNYW VQGKCSFGDK  120
CRFLHSWSLG ESFSLLTQLD GHQKVVTGIA LPSGSDKLYT GSNDETVRVW DCHSGQCMGV  180
IQLGGEVGCM INEDPWIFVG VPNVVKAWNT QNNIDLSLTG PAGQVYALVV GNDLLFAGTQ  240
DGAILAWKFN AVTFNFEPAA SLTGHTVAVV SLVVGANRLY SGSMDHSIRV WNLETLQCVQ  300
TLTEHSSVVM SVLCWDRFLL SCSLDQTIKV WAATESGNLE VTYTHKEEHG LLTLCGMLDF  360
EGKPVLLCSC NDNSVRLFDL PSFSERGKIY AKQEIRAIQT GPGGLFFTGD GTGQVRVWKC  420
VDEPATTA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25440.10.0C3H family protein