PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021635448.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | YABBY | ||||||||
Protein Properties | Length: 222aa MW: 25123.9 Da PI: 8.5107 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 190.2 | 1e-58 | 41 | 186 | 23 | 170 |
YABBY 23 avsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee...lleelkveeenlksnvekeesastsvsseklsenedeevprvpp 114 vsvP t+lfk+vtvrCGhCt+ll vn++ a + hl++s+ + ll+e + ++n+ n+++ + + s+ +++e+pr+p XP_021635448.1 41 QVSVPCTTLFKTVTVRCGHCTNLLPVNMRGLILPSANQFHLGHSFFSPshnLLDEIPNPSSNFLINQTNVN----DFSVPA-RGVTHDELPRPPV 130 79**************************99999999999*****988733355555555555555544444....334433.34556789**999 PP YABBY 115 virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 ++rPPekrqrvPsaynrfik+eiqrika+nPdishreafsaaaknWahfP+ihfgl XP_021635448.1 131 INRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGL 186 ******************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MLSSSFLSFL PLCMSFDHPI RYLCFLSSFL VLLLTFFDLW QVSVPCTTLF KTVTVRCGHC 60 TNLLPVNMRG LILPSANQFH LGHSFFSPSH NLLDEIPNPS SNFLINQTNV NDFSVPARGV 120 THDELPRPPV INRPPEKRQR VPSAYNRFIK DEIQRIKAGN PDISHREAFS AAAKNWAHFP 180 HIHFGLMPDQ TVKKTNVRQQ EGEDVLMKDG FFASANVGVS PY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45190.1 | 2e-74 | YABBY family protein |