PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021635104.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WRKY

Protein Properties

Length: 579aa MW: 64035.7 Da PI: 6.9582

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021635104.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.2	3.4e-33	238	295	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh+k XP_021635104.1 238 EDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSL-DGQITEIVYKGSHNHPK 295 7**************************************.*************85 PP
2	WRKY	106.8	1.1e-33	410	468	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gCpv+k+ver+++d ++v++tYeg+Hnh+ XP_021635104.1 410 LDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHD 468 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 579 aa Download sequence
MAASSGSLDT SANYHPSSFS FSTHSFMTTS FSDLLASGAD DELLNTNTRR GFSDRIAERT 60 GSGVPKFKSI PPPSLPISPP AVSPSSYFAI PPGLSPTELL DSPVLLNTSN ILPSPTTGTF 120 PAQVTNWETN SGRNQQNVKH EDPNYSDFSF QPPIRPPTTS CTMFQSLNTR IQTAQQQGWS 180 FQESVKQDDF SMGKSMRSFS PEIAAIQTNT QTNNGFQSES GGHQQQQFQS VRDQRRSEDG 240 YNWRKYGQKQ VKGSENPRSY YKCTYPNCPT KKKVERSLDG QITEIVYKGS HNHPKPQSTR 300 RSSSSSSSAS NQAMIAPNLA SSEMQDQSLV THGSGQMDSV ATPENSSISI GDDDFDSQKS 360 KSRSDEFDED EPEAKRWKAE GENEEISAPG SRTVREPRVV VQTTSDIDIL DDGYRWRKYG 420 QKVVKGNPNP RSYYKCTHPG CPVRKHVERA SHDLRAVITT YEGKHNHDIP AARGSNSANR 480 PLPENNNGSI NSNKNAAMAV RPLALIHHSN NLTNPLRHLR LPATSEGEAH FSLEMLQNPD 540 NFTFSGFGNX YTNQSSTEXV FSGAKEEPRA EMFLESLLC

Sequence ? help Back to Top

Protein Sequence Length: 579 aa Download sequence

MAASSGSLDT SANYHPSSFS FSTHSFMTTS FSDLLASGAD DELLNTNTRR GFSDRIAERT  60
GSGVPKFKSI PPPSLPISPP AVSPSSYFAI PPGLSPTELL DSPVLLNTSN ILPSPTTGTF  120
PAQVTNWETN SGRNQQNVKH EDPNYSDFSF QPPIRPPTTS CTMFQSLNTR IQTAQQQGWS  180
FQESVKQDDF SMGKSMRSFS PEIAAIQTNT QTNNGFQSES GGHQQQQFQS VRDQRRSEDG  240
YNWRKYGQKQ VKGSENPRSY YKCTYPNCPT KKKVERSLDG QITEIVYKGS HNHPKPQSTR  300
RSSSSSSSAS NQAMIAPNLA SSEMQDQSLV THGSGQMDSV ATPENSSISI GDDDFDSQKS  360
KSRSDEFDED EPEAKRWKAE GENEEISAPG SRTVREPRVV VQTTSDIDIL DDGYRWRKYG  420
QKVVKGNPNP RSYYKCTHPG CPVRKHVERA SHDLRAVITT YEGKHNHDIP AARGSNSANR  480
PLPENNNGSI NSNKNAAMAV RPLALIHHSN NLTNPLRHLR LPATSEGEAH FSLEMLQNPD  540
NFTFSGFGNX YTNQSSTEXV FSGAKEEPRA EMFLESLLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-109	WRKY family protein