PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021635059.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 243aa MW: 26160.4 Da PI: 10.0552 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.2 | 1.3e-20 | 28 | 78 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +++GVr ++ +gr++AeIrdp gk+ r++lg+f+taeeAa+a++aa+++++g+ XP_021635059.1 28 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAAREFRGA 78 69*******.**********8...557*************************985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 243 aa Download sequence |
MAPRDKTAAV KPSGNCGAGA AAGAKEVHFR GVRKRPWGRY AAEIRDPGKK SRVWLGTFDT 60 AEEAARAYDA AAREFRGAKA KTNFLIASEN VNKIVMVNKK NDTGANNQSP SPSSTVESSS 120 RETPALMMES SSPLDLNLCP SAAVRLPFQS VPAVGGAFTA PVMNHQHLLY FDAMMKSQYQ 180 RLLFDHQHLN HQAMSTAGNG RRGGASGAVQ SDSDSSSVVD LNQHEVNPPR KSLDFDLNLP 240 PKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G44210.1 | 9e-25 | ERF family protein |