PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW34862.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 249aa MW: 28720.3 Da PI: 8.4729 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.5 | 4e-15 | 39 | 86 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++lv v++lG ++W+ a+ g++R++k+c++rw +yl RWW34862.1 39 KGPWTEQEDLQLVWFVRLLGERRWDFLAKVSGLNRSGKSCRLRWVNYL 86 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 56.7 | 5.5e-18 | 92 | 141 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqkyl 48 rgr+T++E++l v++++++G++ +W++Iar+++ gRt++++k++w++++ RWW34862.1 92 RGRMTPQEEDLVVELHAKWGNRfdrRWSRIARRLP-GRTDNEIKNYWRTHM 141 89*********************************.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MVWRGCAYKS DTTRREKREE SVKPVYKSPM EPPPPPPTKG PWTEQEDLQL VWFVRLLGER 60 RWDFLAKVSG LNRSGKSCRL RWVNYLHPGL KRGRMTPQEE DLVVELHAKW GNRFDRRWSR 120 IARRLPGRTD NEIKNYWRTH MRKKAQERRT CSPSPSPSSS SSSNGPPSEL RVGDSVAEGS 180 AFTSGLEVTD DEVKGYTMDQ IWNEIAASDS CNMECPPTSS PIWEDKSESL WRLDDEDLRI 240 SNPVSDLLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59780.3 | 1e-69 | MYB family protein |