PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW34806.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | C3H | ||||||||
Protein Properties | Length: 230aa MW: 25000 Da PI: 7.9721 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 31.5 | 3e-10 | 121 | 143 | 4 | 26 |
---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHg 26 ++C++++rtG Ck+ +C+++H+ RWW34806.1 121 KECPYYMRTGNCKFSTNCRYHHP 143 68********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MHGTSSGRYA YRYPIVPKTT REEHEESSSI MEVQTSCRVD EKEKEIAHSF MQLKCEAKAA 60 REKGKETTSE KGQQTEFKAA MEEGKETTLG KGGLIEHKAA MEKGKETTLE KGGQIECKGA 120 KECPYYMRTG NCKFSTNCRY HHPDPTIAMA GQDPLSGCRS SGSMQQSAFG ASTIPVTPSH 180 SQGTLNGATS FVVASPSCSP ASNLHSQGFH SNSGCNGYQV IFTVHVLKFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63260.2 | 1e-10 | C3H family protein |