PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW34789.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | SBP | ||||||||
Protein Properties | Length: 219aa MW: 24109.8 Da PI: 8.6362 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 46.7 | 8.7e-15 | 171 | 201 | 48 | 78 |
SEEETTT--SS--S-STTTT-------S--- CS SBP 48 rfhelsefDeekrsCrrrLakhnerrrkkqa 78 rfh lsefD++krsCrrrL++hn+rrrk+q+ RWW34789.1 171 RFHGLSEFDQNKRSCRRRLSDHNARRRKPQP 201 9***************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MDWIPKTPFQ WDWETLELFS GKESELSKPA QVPDSKIGGG ASICDGSVCS SNGGASSVLE 60 LGNRSSKSSI SASIDFLSET GERKSQFNFD SAEQAPYNLN KSIFARVKGS GTSPASVTAG 120 YAREPLTGLK LGRTSFEDGG AGNNIKNFKM FFYDFGCQSL TEDIMFWPSF RFHGLSEFDQ 180 NKRSCRRRLS DHNARRRKPQ PMTISFSSPR ISSSDHGIT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43270.1 | 2e-12 | SBP family protein |