PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW34589.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Trihelix

Protein Properties

Length: 415aa MW: 47578.7 Da PI: 6.65

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW34589.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	81.8	9e-26	104	199	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 +Wt+ +v++Li+a+++++e++ +++ +kk++W+++sk+m+erg+ +sp+qC++k+++lnkryk+++++ +++ +++++++ +++++++ RWW34589.1 104 KWTDAMVRLLITAVSYIGEDVASECggrrkyailQKKGKWKAISKVMAERGCYVSPQQCEDKFNDLNKRYKRLTDILGRGtSCKVVENPVLLEHMN 199 7*******************988888999999********************************************6699999999999995 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MEGNYPAGSM MPGASYGVLG LQGNMHMRQG SMIHAPMLDT FPMSDNQLPE SDYQAGVSVM 60 GYNKGKAGKT SMSDDDEPSL TKDGTDGQND LGKGEKGSSW QRMKWTDAMV RLLITAVSYI 120 GEDVASECGG RRKYAILQKK GKWKAISKVM AERGCYVSPQ QCEDKFNDLN KRYKRLTDIL 180 GRGTSCKVVE NPVLLEHMNI SEKLKDDARK ILSSKHLFYE EMCSYHNCNR LNLPEDLALQ 240 RSLQLALRSR DEHDTKRSSH EDIDEDDQSA DSNDEEDDAE EHNAVHGFPK RMKLGVNHEE 300 LAFSNCSGSR DCNRNLHPQG LTVDMNQVFS EGSKSAMIQQ QWVSSYPIQL EEKRLHIQTQ 360 MLELERQRYK WQRFSKKKDR ELSIMRMENE RMEIENKRFS LELRKKELEL NLTLK

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MEGNYPAGSM MPGASYGVLG LQGNMHMRQG SMIHAPMLDT FPMSDNQLPE SDYQAGVSVM  60
GYNKGKAGKT SMSDDDEPSL TKDGTDGQND LGKGEKGSSW QRMKWTDAMV RLLITAVSYI  120
GEDVASECGG RRKYAILQKK GKWKAISKVM AERGCYVSPQ QCEDKFNDLN KRYKRLTDIL  180
GRGTSCKVVE NPVLLEHMNI SEKLKDDARK ILSSKHLFYE EMCSYHNCNR LNLPEDLALQ  240
RSLQLALRSR DEHDTKRSSH EDIDEDDQSA DSNDEEDDAE EHNAVHGFPK RMKLGVNHEE  300
LAFSNCSGSR DCNRNLHPQG LTVDMNQVFS EGSKSAMIQQ QWVSSYPIQL EEKRLHIQTQ  360
MLELERQRYK WQRFSKKKDR ELSIMRMENE RMEIENKRFS LELRKKELEL NLTLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-108	Trihelix family protein